Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF34Q969K3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF34Q969K3 AL691432.3-201ENST00000621860 400 ntBASIC18.39■□□□□ 0.53
RNF34Q969K3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF34Q969K3 SIRPAP1-201ENST00000448467 1770 ntBASIC18.39■□□□□ 0.53
RNF34Q969K3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF34Q969K3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF34Q969K3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RNF34Q969K3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF34Q969K3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RNF34Q969K3 NOC2LP2-201ENST00000407594 1944 ntBASIC18.39■□□□□ 0.53
RNF34Q969K3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RNF34Q969K3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
RNF34Q969K3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RNF34Q969K3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF34Q969K3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RNF34Q969K3 AC006116.8-202ENST00000587620 1550 ntBASIC18.38■□□□□ 0.53
RNF34Q969K3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF34Q969K3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF34Q969K3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF34Q969K3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF34Q969K3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF34Q969K3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF34Q969K3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF34Q969K3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF34Q969K3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF34Q969K3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.38■□□□□ 0.53
RNF34Q969K3 TSPY19P-201ENST00000418461 509 ntBASIC18.38■□□□□ 0.53
RNF34Q969K3 DUSP5P1-201ENST00000441325 1139 ntBASIC18.38■□□□□ 0.53
RNF34Q969K3 TSPY18P-201ENST00000441642 509 ntBASIC18.38■□□□□ 0.53
RNF34Q969K3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF34Q969K3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF34Q969K3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RNF34Q969K3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF34Q969K3 INTS4P1-201ENST00000438455 1935 ntBASIC18.38■□□□□ 0.53
RNF34Q969K3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF34Q969K3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF34Q969K3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RNF34Q969K3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF34Q969K3 AC068880.1-201ENST00000507289 2297 ntBASIC18.38■□□□□ 0.53
RNF34Q969K3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF34Q969K3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF34Q969K3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF34Q969K3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RNF34Q969K3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF34Q969K3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF34Q969K3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF34Q969K3 GNAS-203ENST00000306120 1878 ntBASIC18.37■□□□□ 0.53
RNF34Q969K3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF34Q969K3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RNF34Q969K3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RNF34Q969K3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
RNF34Q969K3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF34Q969K3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF34Q969K3 NFIC-211ENST00000641145 8399 ntBASIC18.37■□□□□ 0.53
RNF34Q969K3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF34Q969K3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF34Q969K3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF34Q969K3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
RNF34Q969K3 AC103564.2-201ENST00000432853 1299 ntBASIC18.37■□□□□ 0.53
RNF34Q969K3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF34Q969K3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.37■□□□□ 0.53
RNF34Q969K3 AC122714.2-201ENST00000502787 707 ntBASIC18.37■□□□□ 0.53
RNF34Q969K3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.37■□□□□ 0.53
RNF34Q969K3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF34Q969K3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RNF34Q969K3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF34Q969K3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RNF34Q969K3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF34Q969K3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF34Q969K3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF34Q969K3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF34Q969K3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF34Q969K3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF34Q969K3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF34Q969K3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF34Q969K3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RNF34Q969K3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF34Q969K3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF34Q969K3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF34Q969K3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF34Q969K3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF34Q969K3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF34Q969K3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RNF34Q969K3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF34Q969K3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF34Q969K3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF34Q969K3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF34Q969K3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF34Q969K3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF34Q969K3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF34Q969K3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF34Q969K3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF34Q969K3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF34Q969K3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF34Q969K3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF34Q969K3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF34Q969K3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF34Q969K3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RNF34Q969K3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms