Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
RPGRQ92834 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRQ92834 LSM12-202ENST00000585388 942 ntTSL 3 BASIC21.5■■□□□ 1.03
RPGRQ92834 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.5■■□□□ 1.03
RPGRQ92834 AC093512.1-201ENST00000617969 520 ntBASIC21.5■■□□□ 1.03
RPGRQ92834 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRQ92834 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RPGRQ92834 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.5■■□□□ 1.03
RPGRQ92834 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRQ92834 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRQ92834 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRQ92834 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRQ92834 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.49■■□□□ 1.03
RPGRQ92834 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPGRQ92834 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.49■■□□□ 1.03
RPGRQ92834 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RPGRQ92834 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
RPGRQ92834 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
RPGRQ92834 AL513480.1-201ENST00000451731 511 ntBASIC21.49■■□□□ 1.03
RPGRQ92834 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.49■■□□□ 1.03
RPGRQ92834 SPCS2P1-201ENST00000561636 679 ntBASIC21.49■■□□□ 1.03
RPGRQ92834 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPGRQ92834 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPGRQ92834 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
RPGRQ92834 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPGRQ92834 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.49■■□□□ 1.03
RPGRQ92834 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
RPGRQ92834 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.49■■□□□ 1.03
RPGRQ92834 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RPGRQ92834 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPGRQ92834 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPGRQ92834 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPGRQ92834 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RPGRQ92834 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRQ92834 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RPGRQ92834 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RPGRQ92834 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.48■■□□□ 1.03
RPGRQ92834 AC006116.8-202ENST00000587620 1550 ntBASIC21.48■■□□□ 1.03
RPGRQ92834 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.48■■□□□ 1.03
RPGRQ92834 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RPGRQ92834 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRQ92834 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRQ92834 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRQ92834 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RPGRQ92834 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRQ92834 AC092919.2-201ENST00000623631 1645 ntBASIC21.48■■□□□ 1.03
RPGRQ92834 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RPGRQ92834 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RPGRQ92834 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRQ92834 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC21.48■■□□□ 1.03
RPGRQ92834 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.48■■□□□ 1.03
RPGRQ92834 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRQ92834 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRQ92834 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.48■■□□□ 1.03
RPGRQ92834 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.48■■□□□ 1.03
RPGRQ92834 AC022145.2-201ENST00000598203 171 ntBASIC21.48■■□□□ 1.03
RPGRQ92834 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRQ92834 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRQ92834 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRQ92834 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
RPGRQ92834 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRQ92834 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRQ92834 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.48■■□□□ 1.03
RPGRQ92834 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.48■■□□□ 1.03
RPGRQ92834 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.48■■□□□ 1.03
RPGRQ92834 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.48■■□□□ 1.03
RPGRQ92834 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RPGRQ92834 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPGRQ92834 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RPGRQ92834 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.47■■□□□ 1.03
RPGRQ92834 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPGRQ92834 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.47■■□□□ 1.03
RPGRQ92834 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.47■■□□□ 1.03
RPGRQ92834 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPGRQ92834 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPGRQ92834 CALY-203ENST00000368558 825 ntTSL 5 BASIC21.47■■□□□ 1.03
RPGRQ92834 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPGRQ92834 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC21.47■■□□□ 1.03
RPGRQ92834 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC21.47■■□□□ 1.03
RPGRQ92834 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
RPGRQ92834 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.47■■□□□ 1.03
RPGRQ92834 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.47■■□□□ 1.03
RPGRQ92834 AC112191.1-201ENST00000523689 701 ntBASIC21.47■■□□□ 1.03
RPGRQ92834 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC21.47■■□□□ 1.03
RPGRQ92834 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.47■■□□□ 1.03
RPGRQ92834 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.47■■□□□ 1.03
RPGRQ92834 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.47■■□□□ 1.03
RPGRQ92834 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.47■■□□□ 1.03
RPGRQ92834 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.47■■□□□ 1.03
RPGRQ92834 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.47■■□□□ 1.03
RPGRQ92834 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPGRQ92834 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
RPGRQ92834 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RPGRQ92834 BCL2-203ENST00000589955 5011 ntBASIC21.47■■□□□ 1.03
RPGRQ92834 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RPGRQ92834 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RPGRQ92834 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RPGRQ92834 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
RPGRQ92834 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RPGRQ92834 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms