Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SHC3Q92529 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SHC3Q92529 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.7■□□□□ 0.58
SHC3Q92529 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC3Q92529 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC3Q92529 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SHC3Q92529 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SHC3Q92529 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC3Q92529 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC3Q92529 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC3Q92529 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC3Q92529 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC3Q92529 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHC3Q92529 POM121L3P-201ENST00000419331 1163 ntBASIC18.7■□□□□ 0.58
SHC3Q92529 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHC3Q92529 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SHC3Q92529 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SHC3Q92529 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHC3Q92529 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SHC3Q92529 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.7■□□□□ 0.58
SHC3Q92529 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.7■□□□□ 0.58
SHC3Q92529 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHC3Q92529 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHC3Q92529 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SHC3Q92529 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHC3Q92529 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHC3Q92529 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC3Q92529 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC3Q92529 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC3Q92529 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
SHC3Q92529 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC3Q92529 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHC3Q92529 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.69■□□□□ 0.58
SHC3Q92529 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC3Q92529 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC3Q92529 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SHC3Q92529 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHC3Q92529 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SHC3Q92529 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC3Q92529 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.69■□□□□ 0.58
SHC3Q92529 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHC3Q92529 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.69■□□□□ 0.58
SHC3Q92529 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHC3Q92529 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.69■□□□□ 0.58
SHC3Q92529 AC106820.2-201ENST00000563775 3264 ntBASIC18.69■□□□□ 0.58
SHC3Q92529 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC3Q92529 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.69■□□□□ 0.58
SHC3Q92529 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC3Q92529 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.69■□□□□ 0.58
SHC3Q92529 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.69■□□□□ 0.58
SHC3Q92529 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.69■□□□□ 0.58
SHC3Q92529 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.69■□□□□ 0.58
SHC3Q92529 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SHC3Q92529 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.69■□□□□ 0.58
SHC3Q92529 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.69■□□□□ 0.58
SHC3Q92529 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.69■□□□□ 0.58
SHC3Q92529 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.69■□□□□ 0.58
SHC3Q92529 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.69■□□□□ 0.58
SHC3Q92529 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC3Q92529 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC3Q92529 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.69■□□□□ 0.58
SHC3Q92529 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.69■□□□□ 0.58
SHC3Q92529 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.68■□□□□ 0.58
SHC3Q92529 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.68■□□□□ 0.58
SHC3Q92529 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC3Q92529 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC3Q92529 AC009336.1-201ENST00000608941 1553 ntBASIC18.68■□□□□ 0.58
SHC3Q92529 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC3Q92529 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC3Q92529 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC3Q92529 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC3Q92529 BCL2-203ENST00000589955 5011 ntBASIC18.68■□□□□ 0.58
SHC3Q92529 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHC3Q92529 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
SHC3Q92529 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC3Q92529 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC3Q92529 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SHC3Q92529 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC3Q92529 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC3Q92529 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC3Q92529 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.68■□□□□ 0.58
SHC3Q92529 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.68■□□□□ 0.58
SHC3Q92529 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.68■□□□□ 0.58
SHC3Q92529 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.68■□□□□ 0.58
SHC3Q92529 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHC3Q92529 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.68■□□□□ 0.58
SHC3Q92529 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SHC3Q92529 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.68■□□□□ 0.58
SHC3Q92529 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SHC3Q92529 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC3Q92529 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC3Q92529 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC3Q92529 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC3Q92529 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHC3Q92529 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC3Q92529 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC3Q92529 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.68■□□□□ 0.58
SHC3Q92529 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.68■□□□□ 0.58
SHC3Q92529 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC3Q92529 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms