Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 CRYGEP-201ENST00000412192 528 ntBASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 NEFHP1-201ENST00000412845 2629 ntBASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.76■□□□□ 0.91
SH3RF3Q8TEJ3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 LINC00304-203ENST00000565008 1864 ntBASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 RPSAP43-201ENST00000402237 625 ntBASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 VN2R19P-201ENST00000442399 1052 ntBASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 HCG4B-203ENST00000450128 991 ntBASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 AL139327.4-201ENST00000612362 153 ntBASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF3Q8TEJ3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 UPF3AP3-201ENST00000420996 769 ntBASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 AC112482.1-201ENST00000492080 688 ntBASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 AC018845.2-201ENST00000568326 409 ntBASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 LINC01451-201ENST00000623792 534 ntBASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 AL590787.1-201ENST00000568856 1315 ntBASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.74■□□□□ 0.91
SH3RF3Q8TEJ3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SH3RF3Q8TEJ3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.73■□□□□ 0.91
SH3RF3Q8TEJ3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF3Q8TEJ3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF3Q8TEJ3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.73■□□□□ 0.91
SH3RF3Q8TEJ3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.73■□□□□ 0.91
SH3RF3Q8TEJ3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SH3RF3Q8TEJ3 IGLL3P-201ENST00000412472 434 ntBASIC20.73■□□□□ 0.91
SH3RF3Q8TEJ3 ACTG1P4-201ENST00000425123 1122 ntBASIC20.73■□□□□ 0.91
SH3RF3Q8TEJ3 GPX1P2-201ENST00000429271 606 ntBASIC20.73■□□□□ 0.91
SH3RF3Q8TEJ3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF3Q8TEJ3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.73■□□□□ 0.91
SH3RF3Q8TEJ3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms