Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCHCR1Q8TD31 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCHCR1Q8TD31 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCHCR1Q8TD31 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCHCR1Q8TD31 AL162727.3-201ENST00000635661 2787 ntBASIC18.34■□□□□ 0.53
CCHCR1Q8TD31 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCHCR1Q8TD31 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCHCR1Q8TD31 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCHCR1Q8TD31 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CCHCR1Q8TD31 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.33■□□□□ 0.53
CCHCR1Q8TD31 OR6D1P-203ENST00000641209 4860 ntBASIC18.33■□□□□ 0.53
CCHCR1Q8TD31 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.33■□□□□ 0.53
CCHCR1Q8TD31 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
CCHCR1Q8TD31 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCHCR1Q8TD31 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCHCR1Q8TD31 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CCHCR1Q8TD31 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCHCR1Q8TD31 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCHCR1Q8TD31 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCHCR1Q8TD31 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.33■□□□□ 0.52
CCHCR1Q8TD31 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.33■□□□□ 0.52
CCHCR1Q8TD31 AC092597.1-201ENST00000487352 616 ntBASIC18.33■□□□□ 0.52
CCHCR1Q8TD31 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCHCR1Q8TD31 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.33■□□□□ 0.52
CCHCR1Q8TD31 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.33■□□□□ 0.52
CCHCR1Q8TD31 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.33■□□□□ 0.52
CCHCR1Q8TD31 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.33■□□□□ 0.52
CCHCR1Q8TD31 AC079602.3-201ENST00000623931 403 ntBASIC18.33■□□□□ 0.52
CCHCR1Q8TD31 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCHCR1Q8TD31 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCHCR1Q8TD31 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCHCR1Q8TD31 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
CCHCR1Q8TD31 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCHCR1Q8TD31 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCHCR1Q8TD31 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CCHCR1Q8TD31 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.33■□□□□ 0.52
CCHCR1Q8TD31 MST1L-201ENST00000442552 2185 ntBASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 ARMC10P1-201ENST00000313754 855 ntBASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 HLA-F-220ENST00000434407 884 ntBASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 KRT18P35-201ENST00000510488 1269 ntBASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 ZNF444P1-201ENST00000559497 298 ntBASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 HYMAI.1-201ENST00000620949 238 ntBASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.32■□□□□ 0.52
CCHCR1Q8TD31 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 REXO1L11P-201ENST00000620964 1927 ntBASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 AC011676.5-201ENST00000624864 2660 ntBASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.31■□□□□ 0.52
CCHCR1Q8TD31 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.3■□□□□ 0.52
CCHCR1Q8TD31 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCHCR1Q8TD31 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.3■□□□□ 0.52
CCHCR1Q8TD31 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms