Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 FP475955.4-201ENST00000623131 1990 ntBASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC9.64□□□□□ -0.87
SPTSSBQ8NFR3 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 CDV3P1-201ENST00000471403 739 ntBASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 MIR4787-201ENST00000607364 84 ntBASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SPTSSBQ8NFR3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 AL139385.1-201ENST00000611744 3272 ntBASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms