Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 SPDYE21P-201ENST00000413323 827 ntBASIC17.92■□□□□ 0.46
KDM1BQ8NB78 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 AC120114.3-201ENST00000611923 658 ntBASIC17.92■□□□□ 0.46
KDM1BQ8NB78 MIR7706-201ENST00000613747 67 ntBASIC17.92■□□□□ 0.46
KDM1BQ8NB78 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 AL022326.1-202ENST00000641533 845 ntBASIC17.92■□□□□ 0.46
KDM1BQ8NB78 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.92■□□□□ 0.46
KDM1BQ8NB78 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 AC139713.2-201ENST00000641328 2723 ntBASIC17.92■□□□□ 0.46
KDM1BQ8NB78 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
KDM1BQ8NB78 AL049757.1-201ENST00000616842 1596 ntBASIC17.91■□□□□ 0.46
KDM1BQ8NB78 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 OR7E14P-202ENST00000530490 1290 ntBASIC17.91■□□□□ 0.46
KDM1BQ8NB78 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 MTDHP4-201ENST00000600287 670 ntBASIC17.91■□□□□ 0.46
KDM1BQ8NB78 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 AC107918.4-202ENST00000641623 219 ntBASIC17.91■□□□□ 0.46
KDM1BQ8NB78 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 KRT18P55-202ENST00000578578 1546 ntBASIC17.91■□□□□ 0.46
KDM1BQ8NB78 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KDM1BQ8NB78 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KDM1BQ8NB78 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KDM1BQ8NB78 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KDM1BQ8NB78 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KDM1BQ8NB78 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
KDM1BQ8NB78 LAGE3P1-201ENST00000425356 484 ntBASIC17.9■□□□□ 0.46
KDM1BQ8NB78 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.9■□□□□ 0.46
KDM1BQ8NB78 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.9■□□□□ 0.46
KDM1BQ8NB78 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms