Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 MIR583HG-201ENST00000507997 704 ntTSL 2 BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 AC026616.1-201ENST00000523157 525 ntBASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 AL136038.3-201ENST00000561909 1096 ntBASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 HOXB1-202ENST00000577092 1414 ntBASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 AL023806.1-201ENST00000603994 1649 ntBASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 RPS20P25-201ENST00000412447 352 ntBASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 AL157762.1-201ENST00000619612 415 ntBASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 AC048344.4-201ENST00000619744 527 ntBASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 KRT8P7-201ENST00000533003 1432 ntBASIC17.52■□□□□ 0.4
EFCAB3Q8N7B9 LINC00602-201ENST00000629776 2065 ntBASIC17.52■□□□□ 0.39
EFCAB3Q8N7B9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
EFCAB3Q8N7B9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
EFCAB3Q8N7B9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.52■□□□□ 0.39
EFCAB3Q8N7B9 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
EFCAB3Q8N7B9 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
EFCAB3Q8N7B9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
EFCAB3Q8N7B9 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.52■□□□□ 0.39
EFCAB3Q8N7B9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
EFCAB3Q8N7B9 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 AC024243.1-201ENST00000609234 778 ntBASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.51■□□□□ 0.39
EFCAB3Q8N7B9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms