Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 AC008735.5-201ENST00000623544 497 ntBASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 AC073592.4-201ENST00000623827 446 ntBASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 AC107918.4-202ENST00000641623 219 ntBASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
PHTF2Q8N3S3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PHTF2Q8N3S3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PHTF2Q8N3S3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 GNAS-203ENST00000306120 1878 ntBASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 HLA-J-201ENST00000462773 1622 ntBASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 AC098831.1-202ENST00000438821 336 ntBASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PHTF2Q8N3S3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 AC034105.1-201ENST00000563488 319 ntBASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 ZNF259P1-201ENST00000407656 1365 ntBASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PHTF2Q8N3S3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PHTF2Q8N3S3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
PHTF2Q8N3S3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHTF2Q8N3S3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PHTF2Q8N3S3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHTF2Q8N3S3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHTF2Q8N3S3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PHTF2Q8N3S3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHTF2Q8N3S3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PHTF2Q8N3S3 AC093677.2-201ENST00000600169 1863 ntBASIC18.12■□□□□ 0.49
PHTF2Q8N3S3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.12■□□□□ 0.49
PHTF2Q8N3S3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHTF2Q8N3S3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.12■□□□□ 0.49
PHTF2Q8N3S3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
PHTF2Q8N3S3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHTF2Q8N3S3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms