Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
XRN1Q8IZH2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC24.08■■□□□ 1.45
XRN1Q8IZH2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
XRN1Q8IZH2 GNAS-203ENST00000306120 1878 ntBASIC24.08■■□□□ 1.45
XRN1Q8IZH2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
XRN1Q8IZH2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
XRN1Q8IZH2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
XRN1Q8IZH2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC24.08■■□□□ 1.45
XRN1Q8IZH2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
XRN1Q8IZH2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
XRN1Q8IZH2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC24.08■■□□□ 1.44
XRN1Q8IZH2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
XRN1Q8IZH2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
XRN1Q8IZH2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
XRN1Q8IZH2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC24.07■■□□□ 1.44
XRN1Q8IZH2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
XRN1Q8IZH2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC24.07■■□□□ 1.44
XRN1Q8IZH2 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC24.07■■□□□ 1.44
XRN1Q8IZH2 AC069120.2-201ENST00000524091 540 ntBASIC24.07■■□□□ 1.44
XRN1Q8IZH2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
XRN1Q8IZH2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
XRN1Q8IZH2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
XRN1Q8IZH2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
XRN1Q8IZH2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC24.07■■□□□ 1.44
XRN1Q8IZH2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
XRN1Q8IZH2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
XRN1Q8IZH2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC24.07■■□□□ 1.44
XRN1Q8IZH2 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
XRN1Q8IZH2 LINC01225-203ENST00000563550 1244 ntBASIC24.07■■□□□ 1.44
XRN1Q8IZH2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
XRN1Q8IZH2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
XRN1Q8IZH2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC24.07■■□□□ 1.44
XRN1Q8IZH2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
XRN1Q8IZH2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
XRN1Q8IZH2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
XRN1Q8IZH2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
XRN1Q8IZH2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC24.05■■□□□ 1.44
XRN1Q8IZH2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC24.05■■□□□ 1.44
XRN1Q8IZH2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC24.05■■□□□ 1.44
XRN1Q8IZH2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC24.05■■□□□ 1.44
XRN1Q8IZH2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
XRN1Q8IZH2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC24.05■■□□□ 1.44
XRN1Q8IZH2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
XRN1Q8IZH2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
XRN1Q8IZH2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
XRN1Q8IZH2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
XRN1Q8IZH2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
XRN1Q8IZH2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
XRN1Q8IZH2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
XRN1Q8IZH2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
XRN1Q8IZH2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
XRN1Q8IZH2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
XRN1Q8IZH2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
XRN1Q8IZH2 AC004890.2-204ENST00000481968 304 ntBASIC24.04■■□□□ 1.44
XRN1Q8IZH2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC24.04■■□□□ 1.44
XRN1Q8IZH2 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC24.04■■□□□ 1.44
XRN1Q8IZH2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC24.04■■□□□ 1.44
XRN1Q8IZH2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC24.04■■□□□ 1.44
XRN1Q8IZH2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC24.04■■□□□ 1.44
XRN1Q8IZH2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
XRN1Q8IZH2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC24.04■■□□□ 1.44
XRN1Q8IZH2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
XRN1Q8IZH2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
XRN1Q8IZH2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
XRN1Q8IZH2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC24.04■■□□□ 1.44
XRN1Q8IZH2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC24.04■■□□□ 1.44
XRN1Q8IZH2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
XRN1Q8IZH2 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
XRN1Q8IZH2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC24.04■■□□□ 1.44
XRN1Q8IZH2 MIR4515-201ENST00000584082 81 ntBASIC24.04■■□□□ 1.44
XRN1Q8IZH2 AL161645.1-201ENST00000622716 1255 ntBASIC24.04■■□□□ 1.44
XRN1Q8IZH2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC24.04■■□□□ 1.44
XRN1Q8IZH2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC24.04■■□□□ 1.44
XRN1Q8IZH2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC24.04■■□□□ 1.44
XRN1Q8IZH2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
XRN1Q8IZH2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms