Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC116Q8IYX3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 AC108860.2-201ENST00000562760 2183 ntBASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 AC005104.2-201ENST00000427818 678 ntBASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 DRAXINP1-201ENST00000437611 948 ntBASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 TOB2P1-201ENST00000469761 992 ntBASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC116Q8IYX3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 SIRPAP1-201ENST00000448467 1770 ntBASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 CROCCP2-202ENST00000412962 2773 ntBASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 LINC00265-3P-201ENST00000447588 903 ntBASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC116Q8IYX3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 AC012313.1-201ENST00000593393 3059 ntBASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 AC009533.2-201ENST00000543664 586 ntBASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 MIR3180-1-201ENST00000580374 94 ntBASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 MIR3180-3-201ENST00000584616 94 ntBASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms