Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
SCUBE3Q8IX30 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
SCUBE3Q8IX30 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SCUBE3Q8IX30 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SCUBE3Q8IX30 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.46■□□□□ 0.54
SCUBE3Q8IX30 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.46■□□□□ 0.54
SCUBE3Q8IX30 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 AC111152.3-201ENST00000569699 673 ntBASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 LINC01711-201ENST00000598340 967 ntBASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 IFNL4P1-201ENST00000607083 540 ntBASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 AC006538.3-201ENST00000612495 578 ntBASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 AP005117.1-201ENST00000584346 1413 ntBASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 AC026471.1-201ENST00000564629 3026 ntBASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCUBE3Q8IX30 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCUBE3Q8IX30 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.43■□□□□ 0.54
SCUBE3Q8IX30 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms