Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
UBE3BQ7Z3V4 LINC00304-203ENST00000565008 1864 ntBASIC21.83■■□□□ 1.08
UBE3BQ7Z3V4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
UBE3BQ7Z3V4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
UBE3BQ7Z3V4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
UBE3BQ7Z3V4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBE3BQ7Z3V4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
UBE3BQ7Z3V4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBE3BQ7Z3V4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBE3BQ7Z3V4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBE3BQ7Z3V4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.82■■□□□ 1.08
UBE3BQ7Z3V4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBE3BQ7Z3V4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBE3BQ7Z3V4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBE3BQ7Z3V4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBE3BQ7Z3V4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.82■■□□□ 1.08
UBE3BQ7Z3V4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC21.82■■□□□ 1.08
UBE3BQ7Z3V4 KRT18P3-201ENST00000451602 1288 ntBASIC21.82■■□□□ 1.08
UBE3BQ7Z3V4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.82■■□□□ 1.08
UBE3BQ7Z3V4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBE3BQ7Z3V4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
UBE3BQ7Z3V4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBE3BQ7Z3V4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.82■■□□□ 1.08
UBE3BQ7Z3V4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBE3BQ7Z3V4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
UBE3BQ7Z3V4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
UBE3BQ7Z3V4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
UBE3BQ7Z3V4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UBE3BQ7Z3V4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UBE3BQ7Z3V4 AC046185.3-201ENST00000623228 1824 ntBASIC21.81■■□□□ 1.08
UBE3BQ7Z3V4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
UBE3BQ7Z3V4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
UBE3BQ7Z3V4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC21.81■■□□□ 1.08
UBE3BQ7Z3V4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.81■■□□□ 1.08
UBE3BQ7Z3V4 AL591424.1-201ENST00000442569 1213 ntBASIC21.81■■□□□ 1.08
UBE3BQ7Z3V4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
UBE3BQ7Z3V4 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.81■■□□□ 1.08
UBE3BQ7Z3V4 RPS15P9-201ENST00000494093 319 ntBASIC21.81■■□□□ 1.08
UBE3BQ7Z3V4 AL353135.1-201ENST00000606729 504 ntBASIC21.81■■□□□ 1.08
UBE3BQ7Z3V4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
UBE3BQ7Z3V4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
UBE3BQ7Z3V4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.81■■□□□ 1.08
UBE3BQ7Z3V4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
UBE3BQ7Z3V4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
UBE3BQ7Z3V4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UBE3BQ7Z3V4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 AL355312.1-201ENST00000407115 2176 ntBASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 AC108073.2-201ENST00000464002 357 ntBASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 AC006538.3-201ENST00000612495 578 ntBASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 LINC01451-201ENST00000623792 534 ntBASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBE3BQ7Z3V4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms