Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTR9Q6PD62 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTR9Q6PD62 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTR9Q6PD62 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTR9Q6PD62 KLF4P1-201ENST00000412782 1185 ntBASIC20.83■□□□□ 0.93
CTR9Q6PD62 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.83■□□□□ 0.93
CTR9Q6PD62 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.83■□□□□ 0.93
CTR9Q6PD62 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.83■□□□□ 0.93
CTR9Q6PD62 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.83■□□□□ 0.93
CTR9Q6PD62 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.83■□□□□ 0.93
CTR9Q6PD62 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.83■□□□□ 0.93
CTR9Q6PD62 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.83■□□□□ 0.93
CTR9Q6PD62 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
CTR9Q6PD62 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.83■□□□□ 0.93
CTR9Q6PD62 AC116407.3-201ENST00000623905 1129 ntBASIC20.83■□□□□ 0.93
CTR9Q6PD62 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CTR9Q6PD62 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTR9Q6PD62 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTR9Q6PD62 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTR9Q6PD62 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTR9Q6PD62 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CTR9Q6PD62 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTR9Q6PD62 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTR9Q6PD62 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.83■□□□□ 0.92
CTR9Q6PD62 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTR9Q6PD62 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTR9Q6PD62 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTR9Q6PD62 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CTR9Q6PD62 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
CTR9Q6PD62 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTR9Q6PD62 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTR9Q6PD62 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTR9Q6PD62 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTR9Q6PD62 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTR9Q6PD62 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CTR9Q6PD62 AC005332.8-201ENST00000622750 2735 ntBASIC20.82■□□□□ 0.92
CTR9Q6PD62 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTR9Q6PD62 RPS2P28-201ENST00000314255 741 ntBASIC20.82■□□□□ 0.92
CTR9Q6PD62 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.82■□□□□ 0.92
CTR9Q6PD62 AL022342.1-201ENST00000400363 863 ntBASIC20.82■□□□□ 0.92
CTR9Q6PD62 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTR9Q6PD62 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CTR9Q6PD62 STK19B-204ENST00000512515 211 ntBASIC20.82■□□□□ 0.92
CTR9Q6PD62 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.82■□□□□ 0.92
CTR9Q6PD62 AC139887.3-201ENST00000568585 713 ntBASIC20.82■□□□□ 0.92
CTR9Q6PD62 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.82■□□□□ 0.92
CTR9Q6PD62 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.82■□□□□ 0.92
CTR9Q6PD62 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CTR9Q6PD62 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.82■□□□□ 0.92
CTR9Q6PD62 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.82■□□□□ 0.92
CTR9Q6PD62 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.82■□□□□ 0.92
CTR9Q6PD62 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTR9Q6PD62 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.82■□□□□ 0.92
CTR9Q6PD62 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTR9Q6PD62 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CTR9Q6PD62 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CTR9Q6PD62 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTR9Q6PD62 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CTR9Q6PD62 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.82■□□□□ 0.92
CTR9Q6PD62 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTR9Q6PD62 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTR9Q6PD62 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTR9Q6PD62 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.81■□□□□ 0.92
CTR9Q6PD62 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CTR9Q6PD62 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTR9Q6PD62 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CTR9Q6PD62 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.81■□□□□ 0.92
CTR9Q6PD62 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTR9Q6PD62 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CTR9Q6PD62 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTR9Q6PD62 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTR9Q6PD62 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CTR9Q6PD62 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTR9Q6PD62 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.81■□□□□ 0.92
CTR9Q6PD62 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CTR9Q6PD62 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.81■□□□□ 0.92
CTR9Q6PD62 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.81■□□□□ 0.92
CTR9Q6PD62 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.81■□□□□ 0.92
CTR9Q6PD62 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.81■□□□□ 0.92
CTR9Q6PD62 AC120114.3-201ENST00000611923 658 ntBASIC20.81■□□□□ 0.92
CTR9Q6PD62 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.81■□□□□ 0.92
CTR9Q6PD62 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CTR9Q6PD62 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTR9Q6PD62 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTR9Q6PD62 AC009336.1-201ENST00000608941 1553 ntBASIC20.8■□□□□ 0.92
CTR9Q6PD62 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CTR9Q6PD62 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CTR9Q6PD62 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTR9Q6PD62 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTR9Q6PD62 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.8■□□□□ 0.92
CTR9Q6PD62 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CTR9Q6PD62 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTR9Q6PD62 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.8■□□□□ 0.92
CTR9Q6PD62 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTR9Q6PD62 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTR9Q6PD62 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.8■□□□□ 0.92
CTR9Q6PD62 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTR9Q6PD62 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.8■□□□□ 0.92
CTR9Q6PD62 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.8■□□□□ 0.92
CTR9Q6PD62 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms