Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 KRT18P57-201ENST00000443599 1254 ntBASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 MIR3180-4-201ENST00000582223 153 ntBASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM53Q6P2H8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.14■□□□□ 0.18
TMEM53Q6P2H8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 AC034232.1-201ENST00000506026 1064 ntBASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 AL121761.2-201ENST00000598007 1648 ntBASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 AL499627.1-201ENST00000569373 2188 ntBASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM53Q6P2H8 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM53Q6P2H8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TMEM53Q6P2H8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEM53Q6P2H8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEM53Q6P2H8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM53Q6P2H8 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TMEM53Q6P2H8 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TMEM53Q6P2H8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM53Q6P2H8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEM53Q6P2H8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM53Q6P2H8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEM53Q6P2H8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM53Q6P2H8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM53Q6P2H8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TMEM53Q6P2H8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.13■□□□□ 0.17
TMEM53Q6P2H8 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM53Q6P2H8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM53Q6P2H8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM53Q6P2H8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TMEM53Q6P2H8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.13■□□□□ 0.17
TMEM53Q6P2H8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms