Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 HTR7P1-202ENST00000624664 4411 ntBASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 AC004706.3-202ENST00000621574 984 ntBASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 LINC01451-201ENST00000623792 534 ntBASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 AC117500.6-201ENST00000624871 588 ntBASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 ZNF259P1-201ENST00000407656 1365 ntBASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SWSAP1Q6NVH7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.52■□□□□ 0.71
SWSAP1Q6NVH7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
SWSAP1Q6NVH7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
SWSAP1Q6NVH7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
SWSAP1Q6NVH7 AC097637.2-201ENST00000624096 1997 ntBASIC19.52■□□□□ 0.71
SWSAP1Q6NVH7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.52■□□□□ 0.71
SWSAP1Q6NVH7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 NOC2LP1-202ENST00000452600 2235 ntBASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 AC145285.3-201ENST00000564603 959 ntBASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 NCF1C-201ENST00000438382 1427 ntBASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.51■□□□□ 0.71
SWSAP1Q6NVH7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SWSAP1Q6NVH7 AC006504.4-201ENST00000592118 1568 ntBASIC19.5■□□□□ 0.71
SWSAP1Q6NVH7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SWSAP1Q6NVH7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.5■□□□□ 0.71
SWSAP1Q6NVH7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SWSAP1Q6NVH7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.5■□□□□ 0.71
SWSAP1Q6NVH7 UNC93B6-202ENST00000528242 690 ntBASIC19.5■□□□□ 0.71
SWSAP1Q6NVH7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.5■□□□□ 0.71
SWSAP1Q6NVH7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.5■□□□□ 0.71
SWSAP1Q6NVH7 MIR1199-201ENST00000621445 119 ntBASIC19.5■□□□□ 0.71
SWSAP1Q6NVH7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SWSAP1Q6NVH7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.5■□□□□ 0.71
SWSAP1Q6NVH7 AC007613.1-201ENST00000572811 2597 ntBASIC19.5■□□□□ 0.71
SWSAP1Q6NVH7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.5■□□□□ 0.71
SWSAP1Q6NVH7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
SWSAP1Q6NVH7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SWSAP1Q6NVH7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.5■□□□□ 0.71
SWSAP1Q6NVH7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SWSAP1Q6NVH7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.5■□□□□ 0.71
SWSAP1Q6NVH7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SWSAP1Q6NVH7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SWSAP1Q6NVH7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SWSAP1Q6NVH7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SWSAP1Q6NVH7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms