Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 AL512384.1-201ENST00000406683 331 ntBASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 KRT8P23-201ENST00000560090 1207 ntBASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H2BCQ6DN03 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 SLC25A6P2-201ENST00000497974 877 ntBASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 AC140912.1-201ENST00000577171 1054 ntBASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 AKAP8P1-201ENST00000434743 1349 ntBASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 AL590787.1-201ENST00000568856 1315 ntBASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.88□□□□□ -0.03
HIST2H2BCQ6DN03 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 STK25P1-201ENST00000585406 838 ntBASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 SPDYE12P-201ENST00000618416 771 ntBASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H2BCQ6DN03 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms