Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 AC091076.1-201ENST00000610741 619 ntBASIC20.97■□□□□ 0.95
RNF20Q5VTR2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 AC233702.3-201ENST00000578656 1387 ntBASIC20.97■□□□□ 0.95
RNF20Q5VTR2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF20Q5VTR2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
RNF20Q5VTR2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.96■□□□□ 0.95
RNF20Q5VTR2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF20Q5VTR2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF20Q5VTR2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF20Q5VTR2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF20Q5VTR2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RNF20Q5VTR2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RNF20Q5VTR2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF20Q5VTR2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF20Q5VTR2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.96■□□□□ 0.95
RNF20Q5VTR2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RNF20Q5VTR2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.96■□□□□ 0.95
RNF20Q5VTR2 TPSP2-201ENST00000561760 610 ntBASIC20.96■□□□□ 0.95
RNF20Q5VTR2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF20Q5VTR2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
RNF20Q5VTR2 AP002414.4-201ENST00000589764 1148 ntBASIC20.96■□□□□ 0.95
RNF20Q5VTR2 AC019129.2-201ENST00000609837 1235 ntBASIC20.96■□□□□ 0.95
RNF20Q5VTR2 AL358472.4-201ENST00000633140 710 ntBASIC20.96■□□□□ 0.95
RNF20Q5VTR2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF20Q5VTR2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF20Q5VTR2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF20Q5VTR2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF20Q5VTR2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
RNF20Q5VTR2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
RNF20Q5VTR2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.95
RNF20Q5VTR2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 AP002383.4-201ENST00000442518 975 ntBASIC20.95■□□□□ 0.94
RNF20Q5VTR2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 AC091607.1-201ENST00000490318 1060 ntBASIC20.95■□□□□ 0.94
RNF20Q5VTR2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 AC111152.3-201ENST00000569699 673 ntBASIC20.95■□□□□ 0.94
RNF20Q5VTR2 AC109462.3-201ENST00000573934 613 ntBASIC20.95■□□□□ 0.94
RNF20Q5VTR2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 AC069148.1-201ENST00000608741 768 ntBASIC20.95■□□□□ 0.94
RNF20Q5VTR2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF20Q5VTR2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF20Q5VTR2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF20Q5VTR2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF20Q5VTR2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF20Q5VTR2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RNF20Q5VTR2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RNF20Q5VTR2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF20Q5VTR2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF20Q5VTR2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF20Q5VTR2 ARMC10P1-201ENST00000313754 855 ntBASIC20.94■□□□□ 0.94
RNF20Q5VTR2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RNF20Q5VTR2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
RNF20Q5VTR2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF20Q5VTR2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF20Q5VTR2 AP005901.3-202ENST00000581653 237 ntBASIC20.94■□□□□ 0.94
RNF20Q5VTR2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF20Q5VTR2 AL445228.2-201ENST00000605589 952 ntBASIC20.94■□□□□ 0.94
RNF20Q5VTR2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF20Q5VTR2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RNF20Q5VTR2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF20Q5VTR2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF20Q5VTR2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF20Q5VTR2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF20Q5VTR2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF20Q5VTR2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RNF20Q5VTR2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms