Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 TUBB3P1-201ENST00000405796 1332 ntBASIC21.91■■□□□ 1.1
RC3H1Q5TC82 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 BASP1P1-201ENST00000430708 665 ntBASIC21.91■■□□□ 1.1
RC3H1Q5TC82 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 MMP17-203ENST00000535004 719 ntTSL 3 BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.9■■□□□ 1.1
RC3H1Q5TC82 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.9■■□□□ 1.1
RC3H1Q5TC82 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.9■■□□□ 1.1
RC3H1Q5TC82 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RC3H1Q5TC82 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.9■■□□□ 1.1
RC3H1Q5TC82 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.9■■□□□ 1.1
RC3H1Q5TC82 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RC3H1Q5TC82 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RC3H1Q5TC82 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC21.9■■□□□ 1.1
RC3H1Q5TC82 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RC3H1Q5TC82 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
RC3H1Q5TC82 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RC3H1Q5TC82 MIR4515-201ENST00000584082 81 ntBASIC21.9■■□□□ 1.1
RC3H1Q5TC82 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RC3H1Q5TC82 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RC3H1Q5TC82 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RC3H1Q5TC82 AP000997.3-201ENST00000623333 2250 ntBASIC21.9■■□□□ 1.1
RC3H1Q5TC82 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
RC3H1Q5TC82 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RC3H1Q5TC82 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RC3H1Q5TC82 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
RC3H1Q5TC82 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
RC3H1Q5TC82 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.89■■□□□ 1.09
RC3H1Q5TC82 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RC3H1Q5TC82 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RC3H1Q5TC82 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RC3H1Q5TC82 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RC3H1Q5TC82 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RC3H1Q5TC82 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RC3H1Q5TC82 KRT18P32-201ENST00000424695 1287 ntBASIC21.89■■□□□ 1.09
RC3H1Q5TC82 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RC3H1Q5TC82 AL135744.1-201ENST00000565098 629 ntBASIC21.89■■□□□ 1.09
RC3H1Q5TC82 RARRES2P8-201ENST00000566335 367 ntBASIC21.89■■□□□ 1.09
RC3H1Q5TC82 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
RC3H1Q5TC82 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
RC3H1Q5TC82 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
RC3H1Q5TC82 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RC3H1Q5TC82 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RC3H1Q5TC82 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RC3H1Q5TC82 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
RC3H1Q5TC82 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC21.88■■□□□ 1.09
RC3H1Q5TC82 AC063926.2-201ENST00000623766 1308 ntBASIC21.88■■□□□ 1.09
RC3H1Q5TC82 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RC3H1Q5TC82 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
RC3H1Q5TC82 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RC3H1Q5TC82 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RC3H1Q5TC82 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.88■■□□□ 1.09
RC3H1Q5TC82 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC21.88■■□□□ 1.09
RC3H1Q5TC82 AC002472.2-201ENST00000442739 958 ntBASIC21.88■■□□□ 1.09
RC3H1Q5TC82 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
RC3H1Q5TC82 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.88■■□□□ 1.09
RC3H1Q5TC82 AC087641.1-201ENST00000557561 1021 ntBASIC21.88■■□□□ 1.09
RC3H1Q5TC82 LINC01225-203ENST00000563550 1244 ntBASIC21.88■■□□□ 1.09
RC3H1Q5TC82 RN7SL204P-201ENST00000582831 262 ntBASIC21.88■■□□□ 1.09
RC3H1Q5TC82 AC084121.4-201ENST00000641598 221 ntBASIC21.88■■□□□ 1.09
RC3H1Q5TC82 AF228730.8-201ENST00000642140 221 ntBASIC21.88■■□□□ 1.09
RC3H1Q5TC82 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC21.88■■□□□ 1.09
RC3H1Q5TC82 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC21.88■■□□□ 1.09
RC3H1Q5TC82 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RC3H1Q5TC82 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.88■■□□□ 1.09
RC3H1Q5TC82 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RC3H1Q5TC82 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RC3H1Q5TC82 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RC3H1Q5TC82 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RC3H1Q5TC82 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.88■■□□□ 1.09
RC3H1Q5TC82 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 MIR661-201ENST00000384842 89 ntBASIC21.87■■□□□ 1.09
RC3H1Q5TC82 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms