Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.38■■□□□ 1.01
TNNI3KQ59H18 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNNI3KQ59H18 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TNNI3KQ59H18 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
TNNI3KQ59H18 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TNNI3KQ59H18 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.38■■□□□ 1.01
TNNI3KQ59H18 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.38■■□□□ 1.01
TNNI3KQ59H18 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNNI3KQ59H18 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TNNI3KQ59H18 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TNNI3KQ59H18 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TNNI3KQ59H18 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.37■■□□□ 1.01
TNNI3KQ59H18 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TNNI3KQ59H18 AL135999.2-201ENST00000622438 1686 ntBASIC21.37■■□□□ 1.01
TNNI3KQ59H18 AC243591.1-201ENST00000452967 1364 ntBASIC21.37■■□□□ 1.01
TNNI3KQ59H18 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.37■■□□□ 1.01
TNNI3KQ59H18 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TNNI3KQ59H18 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TNNI3KQ59H18 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
TNNI3KQ59H18 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TNNI3KQ59H18 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TNNI3KQ59H18 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.37■■□□□ 1.01
TNNI3KQ59H18 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.37■■□□□ 1.01
TNNI3KQ59H18 AC079776.4-201ENST00000511039 504 ntBASIC21.37■■□□□ 1.01
TNNI3KQ59H18 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC21.37■■□□□ 1.01
TNNI3KQ59H18 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.37■■□□□ 1.01
TNNI3KQ59H18 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
TNNI3KQ59H18 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TNNI3KQ59H18 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
TNNI3KQ59H18 AL589182.2-201ENST00000619332 1049 ntBASIC21.37■■□□□ 1.01
TNNI3KQ59H18 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
TNNI3KQ59H18 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
TNNI3KQ59H18 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TNNI3KQ59H18 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TNNI3KQ59H18 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TNNI3KQ59H18 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TNNI3KQ59H18 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TNNI3KQ59H18 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TNNI3KQ59H18 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TNNI3KQ59H18 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TNNI3KQ59H18 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
TNNI3KQ59H18 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TNNI3KQ59H18 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TNNI3KQ59H18 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.36■■□□□ 1.01
TNNI3KQ59H18 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.36■■□□□ 1.01
TNNI3KQ59H18 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.36■■□□□ 1.01
TNNI3KQ59H18 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.36■■□□□ 1.01
TNNI3KQ59H18 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC21.36■■□□□ 1.01
TNNI3KQ59H18 LINC00896-202ENST00000609602 2128 ntBASIC21.36■■□□□ 1.01
TNNI3KQ59H18 AC008735.5-201ENST00000623544 497 ntBASIC21.36■■□□□ 1.01
TNNI3KQ59H18 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TNNI3KQ59H18 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TNNI3KQ59H18 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.36■■□□□ 1.01
TNNI3KQ59H18 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
TNNI3KQ59H18 AC097637.2-201ENST00000624096 1997 ntBASIC21.36■■□□□ 1.01
TNNI3KQ59H18 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TNNI3KQ59H18 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TNNI3KQ59H18 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 AC139887.3-201ENST00000568585 713 ntBASIC21.35■■□□□ 1.01
TNNI3KQ59H18 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
TNNI3KQ59H18 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TNNI3KQ59H18 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TNNI3KQ59H18 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.34■■□□□ 1.01
TNNI3KQ59H18 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TNNI3KQ59H18 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
TNNI3KQ59H18 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TNNI3KQ59H18 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC21.34■■□□□ 1.01
TNNI3KQ59H18 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.34■■□□□ 1.01
TNNI3KQ59H18 KRT18P27-201ENST00000427733 1299 ntBASIC21.34■■□□□ 1.01
TNNI3KQ59H18 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.34■■□□□ 1.01
TNNI3KQ59H18 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.34■■□□□ 1.01
TNNI3KQ59H18 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TNNI3KQ59H18 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC21.34■■□□□ 1.01
TNNI3KQ59H18 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.34■■□□□ 1.01
TNNI3KQ59H18 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC21.34■■□□□ 1.01
TNNI3KQ59H18 AC004706.3-202ENST00000621574 984 ntBASIC21.34■■□□□ 1.01
TNNI3KQ59H18 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms