Protein–RNA interactions for Protein: Q2TAM9

TUSC1, Tumor suppressor candidate gene 1 protein, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC1Q2TAM9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 CLEC4GP1-201ENST00000596555 870 ntBASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUSC1Q2TAM9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 HCG4P8-203ENST00000443049 980 ntBASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUSC1Q2TAM9 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 AL121761.2-201ENST00000598007 1648 ntBASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 AL117339.1-201ENST00000419779 428 ntTSL 2 BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 RASA4DP-201ENST00000460726 1199 ntBASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 AL121894.2-201ENST00000602977 491 ntBASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUSC1Q2TAM9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TUSC1Q2TAM9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TUSC1Q2TAM9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms