Protein–RNA interactions for Protein: Q13296

SCGB2A2, Mammaglobin-A, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB2A2Q13296 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 AC004832.2-201ENST00000426397 482 ntBASIC14.43□□□□□ -0.1
SCGB2A2Q13296 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 AC103564.2-201ENST00000432853 1299 ntBASIC14.43□□□□□ -0.1
SCGB2A2Q13296 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 AC034105.1-201ENST00000563488 319 ntBASIC14.43□□□□□ -0.1
SCGB2A2Q13296 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SCGB2A2Q13296 AC005082.1-201ENST00000413042 2259 ntBASIC14.43□□□□□ -0.1
SCGB2A2Q13296 MIR600HG-201ENST00000449175 5984 ntBASIC14.43□□□□□ -0.1
SCGB2A2Q13296 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 NKAPP1-205ENST00000585790 367 ntBASIC14.42□□□□□ -0.1
SCGB2A2Q13296 AC010327.4-202ENST00000591484 748 ntBASIC14.42□□□□□ -0.1
SCGB2A2Q13296 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.42□□□□□ -0.1
SCGB2A2Q13296 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SCGB2A2Q13296 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.41□□□□□ -0.1
SCGB2A2Q13296 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms