Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.33■□□□□ 0.2
CD47Q08722 AC009947.2-201ENST00000444014 672 ntBASIC16.33■□□□□ 0.2
CD47Q08722 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.33■□□□□ 0.2
CD47Q08722 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.33■□□□□ 0.2
CD47Q08722 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD47Q08722 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CD47Q08722 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.33■□□□□ 0.2
CD47Q08722 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.33■□□□□ 0.2
CD47Q08722 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.33■□□□□ 0.2
CD47Q08722 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD47Q08722 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.33■□□□□ 0.2
CD47Q08722 CROCCP1-201ENST00000426910 5675 ntBASIC16.33■□□□□ 0.2
CD47Q08722 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CD47Q08722 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CD47Q08722 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD47Q08722 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.33■□□□□ 0.2
CD47Q08722 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD47Q08722 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD47Q08722 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD47Q08722 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD47Q08722 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD47Q08722 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD47Q08722 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CD47Q08722 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.33■□□□□ 0.2
CD47Q08722 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.33■□□□□ 0.2
CD47Q08722 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.33■□□□□ 0.2
CD47Q08722 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CD47Q08722 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
CD47Q08722 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CD47Q08722 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CD47Q08722 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CD47Q08722 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CD47Q08722 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.32■□□□□ 0.2
CD47Q08722 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.32■□□□□ 0.2
CD47Q08722 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.32■□□□□ 0.2
CD47Q08722 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.32■□□□□ 0.2
CD47Q08722 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CD47Q08722 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.32■□□□□ 0.2
CD47Q08722 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CD47Q08722 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.32■□□□□ 0.2
CD47Q08722 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.32■□□□□ 0.2
CD47Q08722 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.32■□□□□ 0.2
CD47Q08722 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 FAM87A-204ENST00000613235 858 ntBASIC16.32■□□□□ 0.2
CD47Q08722 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.32■□□□□ 0.2
CD47Q08722 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CD47Q08722 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD47Q08722 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD47Q08722 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.31■□□□□ 0.2
CD47Q08722 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.31■□□□□ 0.2
CD47Q08722 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD47Q08722 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CD47Q08722 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.31■□□□□ 0.2
CD47Q08722 REXO1L11P-201ENST00000620964 1927 ntBASIC16.31■□□□□ 0.2
CD47Q08722 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD47Q08722 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD47Q08722 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD47Q08722 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.31■□□□□ 0.2
CD47Q08722 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD47Q08722 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD47Q08722 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD47Q08722 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD47Q08722 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CD47Q08722 KRT18P22-201ENST00000402024 1347 ntBASIC16.31■□□□□ 0.2
CD47Q08722 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD47Q08722 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD47Q08722 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD47Q08722 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD47Q08722 AC104390.1-201ENST00000555663 520 ntBASIC16.31■□□□□ 0.2
CD47Q08722 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD47Q08722 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.31■□□□□ 0.2
CD47Q08722 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD47Q08722 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD47Q08722 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CD47Q08722 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD47Q08722 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.31■□□□□ 0.2
CD47Q08722 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms