Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
NKX6-1P78426 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NKX6-1P78426 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NKX6-1P78426 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NKX6-1P78426 PRORSD1P-202ENST00000563365 2154 ntBASIC15.48■□□□□ 0.07
NKX6-1P78426 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NKX6-1P78426 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.48■□□□□ 0.07
NKX6-1P78426 AL096828.2-201ENST00000567259 1965 ntBASIC15.48■□□□□ 0.07
NKX6-1P78426 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NKX6-1P78426 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NKX6-1P78426 AC135776.1-201ENST00000319817 2481 ntBASIC15.48■□□□□ 0.07
NKX6-1P78426 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NKX6-1P78426 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NKX6-1P78426 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.48■□□□□ 0.07
NKX6-1P78426 AC132008.2-207ENST00000454517 770 ntBASIC15.48■□□□□ 0.07
NKX6-1P78426 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.48■□□□□ 0.07
NKX6-1P78426 DUTP2-201ENST00000519164 463 ntBASIC15.48■□□□□ 0.07
NKX6-1P78426 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NKX6-1P78426 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
NKX6-1P78426 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.48■□□□□ 0.07
NKX6-1P78426 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.48■□□□□ 0.07
NKX6-1P78426 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.48■□□□□ 0.07
NKX6-1P78426 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
NKX6-1P78426 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.48■□□□□ 0.07
NKX6-1P78426 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.48■□□□□ 0.07
NKX6-1P78426 BNIP3P18-201ENST00000593976 575 ntBASIC15.48■□□□□ 0.07
NKX6-1P78426 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.48■□□□□ 0.07
NKX6-1P78426 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.48■□□□□ 0.07
NKX6-1P78426 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
NKX6-1P78426 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NKX6-1P78426 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
NKX6-1P78426 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.48■□□□□ 0.07
NKX6-1P78426 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.48■□□□□ 0.07
NKX6-1P78426 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.48■□□□□ 0.07
NKX6-1P78426 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.48■□□□□ 0.07
NKX6-1P78426 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.48■□□□□ 0.07
NKX6-1P78426 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NKX6-1P78426 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NKX6-1P78426 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
NKX6-1P78426 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NKX6-1P78426 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
NKX6-1P78426 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.48■□□□□ 0.07
NKX6-1P78426 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NKX6-1P78426 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
NKX6-1P78426 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NKX6-1P78426 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NKX6-1P78426 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.48■□□□□ 0.07
NKX6-1P78426 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
NKX6-1P78426 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.48■□□□□ 0.07
NKX6-1P78426 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NKX6-1P78426 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NKX6-1P78426 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.47■□□□□ 0.07
NKX6-1P78426 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NKX6-1P78426 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
NKX6-1P78426 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NKX6-1P78426 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
NKX6-1P78426 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.47■□□□□ 0.07
NKX6-1P78426 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NKX6-1P78426 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.47■□□□□ 0.07
NKX6-1P78426 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.47■□□□□ 0.07
NKX6-1P78426 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NKX6-1P78426 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
NKX6-1P78426 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NKX6-1P78426 RPS2P28-201ENST00000314255 741 ntBASIC15.47■□□□□ 0.07
NKX6-1P78426 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NKX6-1P78426 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NKX6-1P78426 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.47■□□□□ 0.07
NKX6-1P78426 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.47■□□□□ 0.07
NKX6-1P78426 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NKX6-1P78426 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.47■□□□□ 0.07
NKX6-1P78426 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.47■□□□□ 0.07
NKX6-1P78426 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NKX6-1P78426 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.47■□□□□ 0.07
NKX6-1P78426 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.47■□□□□ 0.07
NKX6-1P78426 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.47■□□□□ 0.07
NKX6-1P78426 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.47■□□□□ 0.07
NKX6-1P78426 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NKX6-1P78426 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NKX6-1P78426 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX6-1P78426 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.46■□□□□ 0.07
NKX6-1P78426 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NKX6-1P78426 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX6-1P78426 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX6-1P78426 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NKX6-1P78426 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX6-1P78426 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NKX6-1P78426 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.46■□□□□ 0.07
NKX6-1P78426 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX6-1P78426 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
NKX6-1P78426 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX6-1P78426 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX6-1P78426 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX6-1P78426 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX6-1P78426 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NKX6-1P78426 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.46■□□□□ 0.07
NKX6-1P78426 AC005104.2-201ENST00000427818 678 ntBASIC15.46■□□□□ 0.07
NKX6-1P78426 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX6-1P78426 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.46■□□□□ 0.07
NKX6-1P78426 AC112698.1-201ENST00000510299 916 ntBASIC15.46■□□□□ 0.07
NKX6-1P78426 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms