Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCNA1P78396 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCNA1P78396 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCNA1P78396 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCNA1P78396 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.85■□□□□ 0.77
CCNA1P78396 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCNA1P78396 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.84■□□□□ 0.77
CCNA1P78396 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCNA1P78396 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.84■□□□□ 0.77
CCNA1P78396 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.84■□□□□ 0.77
CCNA1P78396 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCNA1P78396 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCNA1P78396 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCNA1P78396 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCNA1P78396 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCNA1P78396 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.84■□□□□ 0.77
CCNA1P78396 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCNA1P78396 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CCNA1P78396 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.84■□□□□ 0.77
CCNA1P78396 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.84■□□□□ 0.77
CCNA1P78396 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.84■□□□□ 0.77
CCNA1P78396 AC112191.1-201ENST00000523689 701 ntBASIC19.84■□□□□ 0.77
CCNA1P78396 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.84■□□□□ 0.77
CCNA1P78396 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.84■□□□□ 0.77
CCNA1P78396 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CCNA1P78396 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCNA1P78396 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCNA1P78396 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.84■□□□□ 0.77
CCNA1P78396 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.84■□□□□ 0.77
CCNA1P78396 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.84■□□□□ 0.77
CCNA1P78396 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCNA1P78396 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
CCNA1P78396 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCNA1P78396 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCNA1P78396 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCNA1P78396 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.84■□□□□ 0.77
CCNA1P78396 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCNA1P78396 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCNA1P78396 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.84■□□□□ 0.77
CCNA1P78396 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCNA1P78396 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCNA1P78396 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.83■□□□□ 0.77
CCNA1P78396 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCNA1P78396 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.83■□□□□ 0.77
CCNA1P78396 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CCNA1P78396 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCNA1P78396 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CCNA1P78396 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCNA1P78396 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.83■□□□□ 0.77
CCNA1P78396 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCNA1P78396 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.77
CCNA1P78396 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCNA1P78396 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCNA1P78396 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CCNA1P78396 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCNA1P78396 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCNA1P78396 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCNA1P78396 AL139400.1-201ENST00000366220 510 ntBASIC19.83■□□□□ 0.77
CCNA1P78396 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCNA1P78396 AC004461.1-201ENST00000412461 403 ntBASIC19.83■□□□□ 0.77
CCNA1P78396 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.83■□□□□ 0.77
CCNA1P78396 AL513480.1-201ENST00000451731 511 ntBASIC19.83■□□□□ 0.77
CCNA1P78396 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCNA1P78396 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.83■□□□□ 0.77
CCNA1P78396 AC025678.2-201ENST00000562061 970 ntBASIC19.83■□□□□ 0.77
CCNA1P78396 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.83■□□□□ 0.77
CCNA1P78396 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.83■□□□□ 0.77
CCNA1P78396 REXO1L9P-201ENST00000604264 2108 ntBASIC19.83■□□□□ 0.77
CCNA1P78396 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.83■□□□□ 0.77
CCNA1P78396 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.83■□□□□ 0.76
CCNA1P78396 AL121761.2-201ENST00000598007 1648 ntBASIC19.83■□□□□ 0.76
CCNA1P78396 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCNA1P78396 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.82■□□□□ 0.76
CCNA1P78396 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCNA1P78396 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCNA1P78396 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCNA1P78396 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.82■□□□□ 0.76
CCNA1P78396 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCNA1P78396 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CCNA1P78396 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCNA1P78396 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.82■□□□□ 0.76
CCNA1P78396 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCNA1P78396 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCNA1P78396 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.82■□□□□ 0.76
CCNA1P78396 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.82■□□□□ 0.76
CCNA1P78396 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCNA1P78396 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CCNA1P78396 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCNA1P78396 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCNA1P78396 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCNA1P78396 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCNA1P78396 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCNA1P78396 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CCNA1P78396 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.81■□□□□ 0.76
CCNA1P78396 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CCNA1P78396 KRT18P55-202ENST00000578578 1546 ntBASIC19.81■□□□□ 0.76
CCNA1P78396 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNA1P78396 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNA1P78396 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCNA1P78396 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms