Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.06■□□□□ 0
ABCA4P78363 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ABCA4P78363 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.06■□□□□ 0
ABCA4P78363 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.06■□□□□ 0
ABCA4P78363 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.06■□□□□ 0
ABCA4P78363 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.06■□□□□ 0
ABCA4P78363 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.06■□□□□ 0
ABCA4P78363 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.06■□□□□ 0
ABCA4P78363 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.06■□□□□ 0
ABCA4P78363 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
ABCA4P78363 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.06■□□□□ 0
ABCA4P78363 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.06■□□□□ 0
ABCA4P78363 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.06■□□□□ 0
ABCA4P78363 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
ABCA4P78363 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ABCA4P78363 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.06■□□□□ 0
ABCA4P78363 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.06■□□□□ 0
ABCA4P78363 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.06■□□□□ 0
ABCA4P78363 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ABCA4P78363 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ABCA4P78363 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ABCA4P78363 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ABCA4P78363 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
ABCA4P78363 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
ABCA4P78363 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
ABCA4P78363 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ABCA4P78363 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
ABCA4P78363 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ABCA4P78363 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.05■□□□□ 0
ABCA4P78363 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ABCA4P78363 BCRP1-201ENST00000444246 691 ntBASIC15.05■□□□□ 0
ABCA4P78363 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
ABCA4P78363 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.05■□□□□ 0
ABCA4P78363 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.05■□□□□ 0
ABCA4P78363 AC005593.1-201ENST00000624894 515 ntBASIC15.05■□□□□ 0
ABCA4P78363 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
ABCA4P78363 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.05■□□□□ 0
ABCA4P78363 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ABCA4P78363 AC093677.2-201ENST00000600169 1863 ntBASIC15.05■□□□□ -0
ABCA4P78363 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
ABCA4P78363 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ABCA4P78363 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.05■□□□□ -0
ABCA4P78363 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.05■□□□□ -0
ABCA4P78363 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
ABCA4P78363 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.05■□□□□ -0
ABCA4P78363 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ABCA4P78363 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.05■□□□□ -0
ABCA4P78363 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.05■□□□□ -0
ABCA4P78363 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
ABCA4P78363 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ABCA4P78363 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.05■□□□□ -0
ABCA4P78363 KRT19P2-202ENST00000557173 1012 ntBASIC15.05■□□□□ -0
ABCA4P78363 PDPK2P-202ENST00000562415 1191 ntBASIC15.05■□□□□ -0
ABCA4P78363 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.05■□□□□ -0
ABCA4P78363 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.05■□□□□ -0
ABCA4P78363 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ABCA4P78363 GPR89P-201ENST00000407924 1495 ntBASIC15.05■□□□□ -0
ABCA4P78363 AL353593.2-201ENST00000602529 1483 ntBASIC15.05■□□□□ -0
ABCA4P78363 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ABCA4P78363 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ -0
ABCA4P78363 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ABCA4P78363 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
ABCA4P78363 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ABCA4P78363 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ABCA4P78363 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
ABCA4P78363 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.05■□□□□ -0
ABCA4P78363 BX276092.7-203ENST00000637198 1536 ntBASIC15.05■□□□□ -0
ABCA4P78363 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
ABCA4P78363 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
ABCA4P78363 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.05■□□□□ -0
ABCA4P78363 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.04■□□□□ -0
ABCA4P78363 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.04■□□□□ -0
ABCA4P78363 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
ABCA4P78363 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.04■□□□□ -0
ABCA4P78363 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.04■□□□□ -0
ABCA4P78363 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.04■□□□□ -0
ABCA4P78363 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
ABCA4P78363 SIGLEC30P-201ENST00000455569 941 ntBASIC15.04■□□□□ -0
ABCA4P78363 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.04■□□□□ -0
ABCA4P78363 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
ABCA4P78363 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.04■□□□□ -0
ABCA4P78363 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
ABCA4P78363 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.04■□□□□ -0
ABCA4P78363 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ABCA4P78363 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.04■□□□□ -0
ABCA4P78363 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ABCA4P78363 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
ABCA4P78363 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ABCA4P78363 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.04■□□□□ -0
ABCA4P78363 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ABCA4P78363 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ABCA4P78363 AL020996.1-203ENST00000536896 2307 ntBASIC15.04■□□□□ -0
ABCA4P78363 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.04■□□□□ -0
ABCA4P78363 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ABCA4P78363 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.04■□□□□ -0
ABCA4P78363 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.04■□□□□ -0
ABCA4P78363 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ABCA4P78363 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ABCA4P78363 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ABCA4P78363 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms