Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN6P56747 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN6P56747 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN6P56747 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN6P56747 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN6P56747 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLDN6P56747 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN6P56747 MRPL20P1-201ENST00000400819 433 ntBASIC16.8■□□□□ 0.28
CLDN6P56747 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.8■□□□□ 0.28
CLDN6P56747 AC010654.1-201ENST00000615722 808 ntBASIC16.8■□□□□ 0.28
CLDN6P56747 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CLDN6P56747 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CLDN6P56747 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN6P56747 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CLDN6P56747 AC093010.1-201ENST00000473625 1624 ntBASIC16.8■□□□□ 0.28
CLDN6P56747 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN6P56747 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN6P56747 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN6P56747 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CLDN6P56747 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CLDN6P56747 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN6P56747 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLDN6P56747 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN6P56747 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.79■□□□□ 0.28
CLDN6P56747 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN6P56747 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN6P56747 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN6P56747 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN6P56747 CROCCP3-202ENST00000420820 1947 ntBASIC16.79■□□□□ 0.28
CLDN6P56747 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CLDN6P56747 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CLDN6P56747 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN6P56747 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN6P56747 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CLDN6P56747 COX20P2-201ENST00000452636 358 ntBASIC16.79■□□□□ 0.28
CLDN6P56747 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.79■□□□□ 0.28
CLDN6P56747 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN6P56747 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN6P56747 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.79■□□□□ 0.28
CLDN6P56747 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN6P56747 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN6P56747 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN6P56747 AC109462.3-201ENST00000573934 613 ntBASIC16.79■□□□□ 0.28
CLDN6P56747 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.79■□□□□ 0.28
CLDN6P56747 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN6P56747 AC019129.2-201ENST00000609837 1235 ntBASIC16.79■□□□□ 0.28
CLDN6P56747 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CLDN6P56747 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN6P56747 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN6P56747 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLDN6P56747 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN6P56747 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN6P56747 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN6P56747 AC100803.2-201ENST00000562459 1963 ntBASIC16.78■□□□□ 0.28
CLDN6P56747 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CLDN6P56747 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.78■□□□□ 0.28
CLDN6P56747 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN6P56747 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CLDN6P56747 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 AL138781.2-201ENST00000617896 1843 ntBASIC16.78■□□□□ 0.28
CLDN6P56747 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN6P56747 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 SIGLEC30P-201ENST00000455569 941 ntBASIC16.78■□□□□ 0.28
CLDN6P56747 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.78■□□□□ 0.28
CLDN6P56747 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 AC096734.2-201ENST00000562054 433 ntBASIC16.78■□□□□ 0.28
CLDN6P56747 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.78■□□□□ 0.28
CLDN6P56747 AC239800.4-201ENST00000603712 296 ntBASIC16.78■□□□□ 0.28
CLDN6P56747 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDN6P56747 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CLDN6P56747 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 AC097637.2-201ENST00000624096 1997 ntBASIC16.78■□□□□ 0.28
CLDN6P56747 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN6P56747 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN6P56747 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CLDN6P56747 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN6P56747 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CLDN6P56747 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN6P56747 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN6P56747 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN6P56747 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN6P56747 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms