Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GFERP55789 AC012317.2-201ENST00000623305 2251 ntBASIC16.74■□□□□ 0.27
GFERP55789 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
GFERP55789 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.74■□□□□ 0.27
GFERP55789 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.74■□□□□ 0.27
GFERP55789 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.74■□□□□ 0.27
GFERP55789 RPS15P9-201ENST00000494093 319 ntBASIC16.74■□□□□ 0.27
GFERP55789 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GFERP55789 RNA5SP416-201ENST00000516838 111 ntBASIC16.74■□□□□ 0.27
GFERP55789 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.74■□□□□ 0.27
GFERP55789 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.74■□□□□ 0.27
GFERP55789 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.74■□□□□ 0.27
GFERP55789 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.74■□□□□ 0.27
GFERP55789 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
GFERP55789 AC064836.3-201ENST00000607928 673 ntBASIC16.74■□□□□ 0.27
GFERP55789 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
GFERP55789 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.74■□□□□ 0.27
GFERP55789 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.74■□□□□ 0.27
GFERP55789 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GFERP55789 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GFERP55789 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GFERP55789 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
GFERP55789 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.74■□□□□ 0.27
GFERP55789 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
GFERP55789 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GFERP55789 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GFERP55789 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.73■□□□□ 0.27
GFERP55789 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.73■□□□□ 0.27
GFERP55789 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.73■□□□□ 0.27
GFERP55789 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
GFERP55789 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
GFERP55789 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.73■□□□□ 0.27
GFERP55789 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
GFERP55789 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.73■□□□□ 0.27
GFERP55789 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
GFERP55789 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.73■□□□□ 0.27
GFERP55789 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 LINC00982-205ENST00000420957 435 ntBASIC16.73■□□□□ 0.27
GFERP55789 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.73■□□□□ 0.27
GFERP55789 AC108073.2-201ENST00000464002 357 ntBASIC16.73■□□□□ 0.27
GFERP55789 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.73■□□□□ 0.27
GFERP55789 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.73■□□□□ 0.27
GFERP55789 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.73■□□□□ 0.27
GFERP55789 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
GFERP55789 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
GFERP55789 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.73■□□□□ 0.27
GFERP55789 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
GFERP55789 BCL2-203ENST00000589955 5011 ntBASIC16.73■□□□□ 0.27
GFERP55789 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.73■□□□□ 0.27
GFERP55789 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
GFERP55789 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFERP55789 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.72■□□□□ 0.27
GFERP55789 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFERP55789 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFERP55789 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFERP55789 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GFERP55789 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.72■□□□□ 0.27
GFERP55789 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFERP55789 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFERP55789 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFERP55789 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.72■□□□□ 0.27
GFERP55789 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GFERP55789 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GFERP55789 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFERP55789 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.72■□□□□ 0.27
GFERP55789 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
GFERP55789 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFERP55789 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GFERP55789 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.72■□□□□ 0.27
GFERP55789 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.72■□□□□ 0.27
GFERP55789 MIR1233-2-201ENST00000408138 82 ntBASIC16.72■□□□□ 0.27
GFERP55789 MIR1233-1-201ENST00000408722 82 ntBASIC16.72■□□□□ 0.27
GFERP55789 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.72■□□□□ 0.27
GFERP55789 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.72■□□□□ 0.27
GFERP55789 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.72■□□□□ 0.27
GFERP55789 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.72■□□□□ 0.27
GFERP55789 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms