Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GPC3P51654 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.38■□□□□ 0.69
GPC3P51654 AC023511.2-201ENST00000618803 211 ntBASIC19.38■□□□□ 0.69
GPC3P51654 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
GPC3P51654 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC3P51654 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC3P51654 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.37■□□□□ 0.69
GPC3P51654 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.37■□□□□ 0.69
GPC3P51654 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC3P51654 AC134043.2-201ENST00000624206 2238 ntBASIC19.37■□□□□ 0.69
GPC3P51654 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.37■□□□□ 0.69
GPC3P51654 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC3P51654 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC3P51654 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
GPC3P51654 AP002414.3-201ENST00000589352 1468 ntBASIC19.37■□□□□ 0.69
GPC3P51654 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
GPC3P51654 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GPC3P51654 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
GPC3P51654 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.37■□□□□ 0.69
GPC3P51654 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.37■□□□□ 0.69
GPC3P51654 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
GPC3P51654 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.37■□□□□ 0.69
GPC3P51654 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.37■□□□□ 0.69
GPC3P51654 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.37■□□□□ 0.69
GPC3P51654 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.37■□□□□ 0.69
GPC3P51654 AC105339.3-201ENST00000560043 636 ntBASIC19.37■□□□□ 0.69
GPC3P51654 AC145285.3-201ENST00000564603 959 ntBASIC19.37■□□□□ 0.69
GPC3P51654 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.37■□□□□ 0.69
GPC3P51654 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.37■□□□□ 0.69
GPC3P51654 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.37■□□□□ 0.69
GPC3P51654 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
GPC3P51654 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
GPC3P51654 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC3P51654 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC3P51654 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC3P51654 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC3P51654 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.37■□□□□ 0.69
GPC3P51654 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.37■□□□□ 0.69
GPC3P51654 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC3P51654 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC3P51654 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.37■□□□□ 0.69
GPC3P51654 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GPC3P51654 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.36■□□□□ 0.69
GPC3P51654 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GPC3P51654 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GPC3P51654 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.36■□□□□ 0.69
GPC3P51654 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
GPC3P51654 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.36■□□□□ 0.69
GPC3P51654 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPC3P51654 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPC3P51654 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPC3P51654 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GPC3P51654 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPC3P51654 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GPC3P51654 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GPC3P51654 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPC3P51654 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.36■□□□□ 0.69
GPC3P51654 AL020989.1-201ENST00000422979 469 ntBASIC19.36■□□□□ 0.69
GPC3P51654 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.36■□□□□ 0.69
GPC3P51654 KRT18P58-201ENST00000527480 1120 ntBASIC19.36■□□□□ 0.69
GPC3P51654 AC109462.3-201ENST00000573934 613 ntBASIC19.36■□□□□ 0.69
GPC3P51654 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.36■□□□□ 0.69
GPC3P51654 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.36■□□□□ 0.69
GPC3P51654 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPC3P51654 GNAS-203ENST00000306120 1878 ntBASIC19.36■□□□□ 0.69
GPC3P51654 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
GPC3P51654 AC148477.5-201ENST00000625164 1645 ntBASIC19.36■□□□□ 0.69
GPC3P51654 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPC3P51654 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
GPC3P51654 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC3P51654 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GPC3P51654 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC3P51654 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC3P51654 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC3P51654 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
GPC3P51654 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GPC3P51654 ZNF259P1-201ENST00000407656 1365 ntBASIC19.35■□□□□ 0.69
GPC3P51654 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC3P51654 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.35■□□□□ 0.69
GPC3P51654 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.35■□□□□ 0.69
GPC3P51654 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC3P51654 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
GPC3P51654 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GPC3P51654 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.35■□□□□ 0.69
GPC3P51654 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.35■□□□□ 0.69
GPC3P51654 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC3P51654 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GPC3P51654 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
GPC3P51654 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GPC3P51654 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC3P51654 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC3P51654 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC3P51654 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC3P51654 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 AC104109.2-201ENST00000602919 1418 ntBASIC19.34■□□□□ 0.69
GPC3P51654 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.34■□□□□ 0.69
GPC3P51654 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC3P51654 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms