Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.95■□□□□ 0.3
RAB28P51157 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB28P51157 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
RAB28P51157 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB28P51157 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB28P51157 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB28P51157 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB28P51157 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.95■□□□□ 0.3
RAB28P51157 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB28P51157 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB28P51157 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.95■□□□□ 0.3
RAB28P51157 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.95■□□□□ 0.3
RAB28P51157 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.95■□□□□ 0.3
RAB28P51157 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.95■□□□□ 0.3
RAB28P51157 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.95■□□□□ 0.3
RAB28P51157 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RAB28P51157 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.95■□□□□ 0.3
RAB28P51157 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB28P51157 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB28P51157 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB28P51157 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.95■□□□□ 0.3
RAB28P51157 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB28P51157 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
RAB28P51157 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.95■□□□□ 0.3
RAB28P51157 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB28P51157 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB28P51157 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB28P51157 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RAB28P51157 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB28P51157 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB28P51157 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.94■□□□□ 0.3
RAB28P51157 AC009336.1-201ENST00000608941 1553 ntBASIC16.94■□□□□ 0.3
RAB28P51157 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB28P51157 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.94■□□□□ 0.3
RAB28P51157 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB28P51157 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
RAB28P51157 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB28P51157 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB28P51157 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB28P51157 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB28P51157 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.94■□□□□ 0.3
RAB28P51157 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
RAB28P51157 AC079781.3-201ENST00000449110 356 ntBASIC16.94■□□□□ 0.3
RAB28P51157 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB28P51157 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.94■□□□□ 0.3
RAB28P51157 AL031008.1-201ENST00000619963 541 ntBASIC16.94■□□□□ 0.3
RAB28P51157 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RAB28P51157 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB28P51157 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB28P51157 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB28P51157 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB28P51157 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB28P51157 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB28P51157 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.94■□□□□ 0.3
RAB28P51157 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB28P51157 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
RAB28P51157 OR6D1P-202ENST00000641007 5290 ntBASIC16.93■□□□□ 0.3
RAB28P51157 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RAB28P51157 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.93■□□□□ 0.3
RAB28P51157 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB28P51157 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB28P51157 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.93■□□□□ 0.3
RAB28P51157 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB28P51157 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB28P51157 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB28P51157 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB28P51157 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB28P51157 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB28P51157 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB28P51157 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB28P51157 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RAB28P51157 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
RAB28P51157 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.93■□□□□ 0.3
RAB28P51157 NKAPP1-205ENST00000585790 367 ntBASIC16.93■□□□□ 0.3
RAB28P51157 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.93■□□□□ 0.3
RAB28P51157 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.93■□□□□ 0.3
RAB28P51157 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB28P51157 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB28P51157 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RAB28P51157 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB28P51157 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
RAB28P51157 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RAB28P51157 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB28P51157 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB28P51157 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB28P51157 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.93■□□□□ 0.3
RAB28P51157 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.93■□□□□ 0.3
RAB28P51157 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.93■□□□□ 0.3
RAB28P51157 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB28P51157 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RAB28P51157 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB28P51157 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB28P51157 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB28P51157 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB28P51157 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB28P51157 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB28P51157 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB28P51157 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB28P51157 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB28P51157 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms