Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRIM2P49643 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRIM2P49643 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRIM2P49643 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRIM2P49643 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
PRIM2P49643 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRIM2P49643 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.74■□□□□ 0.27
PRIM2P49643 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRIM2P49643 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRIM2P49643 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRIM2P49643 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PRIM2P49643 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRIM2P49643 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PRIM2P49643 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRIM2P49643 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRIM2P49643 HBZP1-201ENST00000354915 429 ntBASIC16.74■□□□□ 0.27
PRIM2P49643 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRIM2P49643 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.74■□□□□ 0.27
PRIM2P49643 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.74■□□□□ 0.27
PRIM2P49643 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.74■□□□□ 0.27
PRIM2P49643 TSPY12P-201ENST00000421279 868 ntBASIC16.74■□□□□ 0.27
PRIM2P49643 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.74■□□□□ 0.27
PRIM2P49643 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.74■□□□□ 0.27
PRIM2P49643 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.74■□□□□ 0.27
PRIM2P49643 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRIM2P49643 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRIM2P49643 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.74■□□□□ 0.27
PRIM2P49643 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRIM2P49643 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRIM2P49643 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
PRIM2P49643 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRIM2P49643 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRIM2P49643 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRIM2P49643 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PRIM2P49643 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRIM2P49643 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.74■□□□□ 0.27
PRIM2P49643 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRIM2P49643 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.73■□□□□ 0.27
PRIM2P49643 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRIM2P49643 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.73■□□□□ 0.27
PRIM2P49643 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRIM2P49643 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRIM2P49643 AC009949.1-201ENST00000623048 1830 ntBASIC16.73■□□□□ 0.27
PRIM2P49643 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
PRIM2P49643 LINC01311-201ENST00000565162 1445 ntBASIC16.73■□□□□ 0.27
PRIM2P49643 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PRIM2P49643 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PRIM2P49643 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PRIM2P49643 AC080080.1-201ENST00000625121 2420 ntBASIC16.73■□□□□ 0.27
PRIM2P49643 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRIM2P49643 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRIM2P49643 IGHGP-201ENST00000390555 1178 ntBASIC16.73■□□□□ 0.27
PRIM2P49643 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRIM2P49643 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRIM2P49643 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.73■□□□□ 0.27
PRIM2P49643 AC063952.2-201ENST00000498792 1227 ntBASIC16.73■□□□□ 0.27
PRIM2P49643 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRIM2P49643 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.73■□□□□ 0.27
PRIM2P49643 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.73■□□□□ 0.27
PRIM2P49643 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.73■□□□□ 0.27
PRIM2P49643 AC009154.2-201ENST00000621177 724 ntBASIC16.73■□□□□ 0.27
PRIM2P49643 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRIM2P49643 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRIM2P49643 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRIM2P49643 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRIM2P49643 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.73■□□□□ 0.27
PRIM2P49643 HLA-J-201ENST00000462773 1622 ntBASIC16.73■□□□□ 0.27
PRIM2P49643 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.73■□□□□ 0.27
PRIM2P49643 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRIM2P49643 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.73■□□□□ 0.27
PRIM2P49643 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRIM2P49643 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
PRIM2P49643 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PRIM2P49643 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRIM2P49643 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRIM2P49643 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRIM2P49643 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PRIM2P49643 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.72■□□□□ 0.27
PRIM2P49643 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRIM2P49643 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.72■□□□□ 0.27
PRIM2P49643 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.72■□□□□ 0.27
PRIM2P49643 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.72■□□□□ 0.27
PRIM2P49643 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PRIM2P49643 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRIM2P49643 AC022616.7-201ENST00000525383 220 ntBASIC16.72■□□□□ 0.27
PRIM2P49643 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.72■□□□□ 0.27
PRIM2P49643 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.72■□□□□ 0.27
PRIM2P49643 GPR32P1-201ENST00000601788 811 ntBASIC16.72■□□□□ 0.27
PRIM2P49643 LINC01451-201ENST00000623792 534 ntBASIC16.72■□□□□ 0.27
PRIM2P49643 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.72■□□□□ 0.27
PRIM2P49643 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRIM2P49643 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.72■□□□□ 0.27
PRIM2P49643 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.72■□□□□ 0.27
PRIM2P49643 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.72■□□□□ 0.27
PRIM2P49643 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.72■□□□□ 0.27
PRIM2P49643 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRIM2P49643 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PRIM2P49643 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PRIM2P49643 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRIM2P49643 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms