Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.57■□□□□ 0.56
LHX1P48742 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.57■□□□□ 0.56
LHX1P48742 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.57■□□□□ 0.56
LHX1P48742 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.57■□□□□ 0.56
LHX1P48742 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.57■□□□□ 0.56
LHX1P48742 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
LHX1P48742 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.57■□□□□ 0.56
LHX1P48742 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.57■□□□□ 0.56
LHX1P48742 AC120114.3-201ENST00000611923 658 ntBASIC18.57■□□□□ 0.56
LHX1P48742 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.57■□□□□ 0.56
LHX1P48742 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.57■□□□□ 0.56
LHX1P48742 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
LHX1P48742 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
LHX1P48742 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX1P48742 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.57■□□□□ 0.56
LHX1P48742 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LHX1P48742 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.57■□□□□ 0.56
LHX1P48742 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LHX1P48742 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
LHX1P48742 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LHX1P48742 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LHX1P48742 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LHX1P48742 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
LHX1P48742 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.56■□□□□ 0.56
LHX1P48742 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LHX1P48742 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LHX1P48742 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.56■□□□□ 0.56
LHX1P48742 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LHX1P48742 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.56■□□□□ 0.56
LHX1P48742 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LHX1P48742 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.56■□□□□ 0.56
LHX1P48742 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.56■□□□□ 0.56
LHX1P48742 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.56■□□□□ 0.56
LHX1P48742 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LHX1P48742 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.56■□□□□ 0.56
LHX1P48742 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.56■□□□□ 0.56
LHX1P48742 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.56■□□□□ 0.56
LHX1P48742 AC012640.2-201ENST00000561606 901 ntBASIC18.56■□□□□ 0.56
LHX1P48742 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.56■□□□□ 0.56
LHX1P48742 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.56■□□□□ 0.56
LHX1P48742 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.56■□□□□ 0.56
LHX1P48742 AL355312.1-201ENST00000407115 2176 ntBASIC18.56■□□□□ 0.56
LHX1P48742 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LHX1P48742 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LHX1P48742 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.56■□□□□ 0.56
LHX1P48742 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LHX1P48742 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LHX1P48742 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.56■□□□□ 0.56
LHX1P48742 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.56■□□□□ 0.56
LHX1P48742 AC046185.3-201ENST00000623228 1824 ntBASIC18.56■□□□□ 0.56
LHX1P48742 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX1P48742 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.55■□□□□ 0.56
LHX1P48742 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.55■□□□□ 0.56
LHX1P48742 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.55■□□□□ 0.56
LHX1P48742 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LHX1P48742 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.55■□□□□ 0.56
LHX1P48742 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX1P48742 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
LHX1P48742 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX1P48742 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LHX1P48742 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX1P48742 AL022342.1-201ENST00000400363 863 ntBASIC18.55■□□□□ 0.56
LHX1P48742 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.55■□□□□ 0.56
LHX1P48742 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.55■□□□□ 0.56
LHX1P48742 AC004706.3-202ENST00000621574 984 ntBASIC18.55■□□□□ 0.56
LHX1P48742 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.55■□□□□ 0.56
LHX1P48742 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.55■□□□□ 0.56
LHX1P48742 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LHX1P48742 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.55■□□□□ 0.56
LHX1P48742 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX1P48742 AC097637.2-201ENST00000624096 1997 ntBASIC18.55■□□□□ 0.56
LHX1P48742 AC090340.1-201ENST00000620778 4980 ntBASIC18.55■□□□□ 0.56
LHX1P48742 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX1P48742 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.55■□□□□ 0.56
LHX1P48742 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.55■□□□□ 0.56
LHX1P48742 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX1P48742 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LHX1P48742 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LHX1P48742 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LHX1P48742 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LHX1P48742 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.54■□□□□ 0.56
LHX1P48742 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LHX1P48742 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
LHX1P48742 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.54■□□□□ 0.56
LHX1P48742 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LHX1P48742 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LHX1P48742 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LHX1P48742 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LHX1P48742 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LHX1P48742 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LHX1P48742 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LHX1P48742 KRT18P27-201ENST00000427733 1299 ntBASIC18.54■□□□□ 0.56
LHX1P48742 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.54■□□□□ 0.56
LHX1P48742 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.54■□□□□ 0.56
LHX1P48742 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.54■□□□□ 0.56
LHX1P48742 AC092910.1-201ENST00000482027 1129 ntBASIC18.54■□□□□ 0.56
LHX1P48742 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.54■□□□□ 0.56
LHX1P48742 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LHX1P48742 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.54■□□□□ 0.56
LHX1P48742 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms