Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A12P48065 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A12P48065 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A12P48065 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
SLC6A12P48065 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC6A12P48065 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A12P48065 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A12P48065 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A12P48065 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A12P48065 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC6A12P48065 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A12P48065 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC6A12P48065 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
SLC6A12P48065 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.92■□□□□ 0.3
SLC6A12P48065 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC6A12P48065 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC6A12P48065 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC6A12P48065 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC6A12P48065 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SLC6A12P48065 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A12P48065 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SLC6A12P48065 AC009336.1-201ENST00000608941 1553 ntBASIC16.92■□□□□ 0.3
SLC6A12P48065 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A12P48065 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A12P48065 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A12P48065 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A12P48065 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A12P48065 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC6A12P48065 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A12P48065 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC6A12P48065 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A12P48065 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A12P48065 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A12P48065 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A12P48065 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SLC6A12P48065 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC6A12P48065 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC6A12P48065 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SLC6A12P48065 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A12P48065 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A12P48065 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A12P48065 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC6A12P48065 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A12P48065 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A12P48065 AC003669.1-201ENST00000334569 611 ntBASIC16.91■□□□□ 0.3
SLC6A12P48065 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC6A12P48065 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC6A12P48065 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.91■□□□□ 0.3
SLC6A12P48065 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC6A12P48065 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC6A12P48065 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.91■□□□□ 0.3
SLC6A12P48065 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC6A12P48065 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC6A12P48065 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.91■□□□□ 0.3
SLC6A12P48065 AC093458.2-201ENST00000623150 629 ntBASIC16.91■□□□□ 0.3
SLC6A12P48065 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC6A12P48065 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.91■□□□□ 0.3
SLC6A12P48065 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A12P48065 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A12P48065 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SLC6A12P48065 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC6A12P48065 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SLC6A12P48065 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC6A12P48065 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A12P48065 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A12P48065 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A12P48065 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SLC6A12P48065 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
SLC6A12P48065 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A12P48065 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A12P48065 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A12P48065 PMPCAP1-201ENST00000508114 1576 ntBASIC16.9■□□□□ 0.3
SLC6A12P48065 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A12P48065 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A12P48065 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A12P48065 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
SLC6A12P48065 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
SLC6A12P48065 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A12P48065 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A12P48065 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A12P48065 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A12P48065 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A12P48065 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A12P48065 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.9■□□□□ 0.3
SLC6A12P48065 STK19B-204ENST00000512515 211 ntBASIC16.9■□□□□ 0.3
SLC6A12P48065 AC099336.1-202ENST00000602961 463 ntBASIC16.9■□□□□ 0.3
SLC6A12P48065 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.9■□□□□ 0.3
SLC6A12P48065 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A12P48065 AC073592.5-201ENST00000624854 528 ntBASIC16.9■□□□□ 0.3
SLC6A12P48065 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SLC6A12P48065 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A12P48065 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A12P48065 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A12P48065 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SLC6A12P48065 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A12P48065 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SLC6A12P48065 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
SLC6A12P48065 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A12P48065 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC6A12P48065 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms