Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.51■□□□□ 0.55
GRIK1P39086 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.51■□□□□ 0.55
GRIK1P39086 AC139887.3-201ENST00000568585 713 ntBASIC18.51■□□□□ 0.55
GRIK1P39086 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.51■□□□□ 0.55
GRIK1P39086 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
GRIK1P39086 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.51■□□□□ 0.55
GRIK1P39086 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GRIK1P39086 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
GRIK1P39086 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
GRIK1P39086 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
GRIK1P39086 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GRIK1P39086 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.51■□□□□ 0.55
GRIK1P39086 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.51■□□□□ 0.55
GRIK1P39086 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.51■□□□□ 0.55
GRIK1P39086 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.51■□□□□ 0.55
GRIK1P39086 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GRIK1P39086 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GRIK1P39086 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GRIK1P39086 PKD1P1-201ENST00000458669 6805 ntBASIC18.5■□□□□ 0.55
GRIK1P39086 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
GRIK1P39086 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GRIK1P39086 HLA-J-201ENST00000462773 1622 ntBASIC18.5■□□□□ 0.55
GRIK1P39086 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GRIK1P39086 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GRIK1P39086 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GRIK1P39086 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GRIK1P39086 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.5■□□□□ 0.55
GRIK1P39086 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.5■□□□□ 0.55
GRIK1P39086 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.5■□□□□ 0.55
GRIK1P39086 PRYP5-201ENST00000451909 266 ntBASIC18.5■□□□□ 0.55
GRIK1P39086 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.5■□□□□ 0.55
GRIK1P39086 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.5■□□□□ 0.55
GRIK1P39086 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.5■□□□□ 0.55
GRIK1P39086 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
GRIK1P39086 STK25P1-201ENST00000585406 838 ntBASIC18.5■□□□□ 0.55
GRIK1P39086 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.5■□□□□ 0.55
GRIK1P39086 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.5■□□□□ 0.55
GRIK1P39086 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.5■□□□□ 0.55
GRIK1P39086 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.5■□□□□ 0.55
GRIK1P39086 AC116407.3-201ENST00000623905 1129 ntBASIC18.5■□□□□ 0.55
GRIK1P39086 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
GRIK1P39086 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GRIK1P39086 AC243591.1-201ENST00000452967 1364 ntBASIC18.5■□□□□ 0.55
GRIK1P39086 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GRIK1P39086 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.5■□□□□ 0.55
GRIK1P39086 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GRIK1P39086 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
GRIK1P39086 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GRIK1P39086 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GRIK1P39086 AC012317.2-201ENST00000623305 2251 ntBASIC18.49■□□□□ 0.55
GRIK1P39086 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GRIK1P39086 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.49■□□□□ 0.55
GRIK1P39086 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GRIK1P39086 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GRIK1P39086 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
GRIK1P39086 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
GRIK1P39086 AC148477.5-201ENST00000625164 1645 ntBASIC18.49■□□□□ 0.55
GRIK1P39086 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GRIK1P39086 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GRIK1P39086 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GRIK1P39086 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GRIK1P39086 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GRIK1P39086 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
GRIK1P39086 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GRIK1P39086 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.49■□□□□ 0.55
GRIK1P39086 SIGLEC30P-201ENST00000455569 941 ntBASIC18.49■□□□□ 0.55
GRIK1P39086 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
GRIK1P39086 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.49■□□□□ 0.55
GRIK1P39086 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.49■□□□□ 0.55
GRIK1P39086 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.49■□□□□ 0.55
GRIK1P39086 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.49■□□□□ 0.55
GRIK1P39086 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.49■□□□□ 0.55
GRIK1P39086 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.49■□□□□ 0.55
GRIK1P39086 AC107918.4-202ENST00000641623 219 ntBASIC18.49■□□□□ 0.55
GRIK1P39086 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.49■□□□□ 0.55
GRIK1P39086 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GRIK1P39086 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GRIK1P39086 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
GRIK1P39086 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GRIK1P39086 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GRIK1P39086 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GRIK1P39086 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GRIK1P39086 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GRIK1P39086 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
GRIK1P39086 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GRIK1P39086 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.48■□□□□ 0.55
GRIK1P39086 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
GRIK1P39086 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
GRIK1P39086 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GRIK1P39086 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.48■□□□□ 0.55
GRIK1P39086 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.48■□□□□ 0.55
GRIK1P39086 MYCLP1-201ENST00000372451 1075 ntBASIC18.48■□□□□ 0.55
GRIK1P39086 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.48■□□□□ 0.55
GRIK1P39086 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.48■□□□□ 0.55
GRIK1P39086 AC092910.1-201ENST00000482027 1129 ntBASIC18.48■□□□□ 0.55
GRIK1P39086 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GRIK1P39086 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.48■□□□□ 0.55
GRIK1P39086 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.48■□□□□ 0.55
GRIK1P39086 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
GRIK1P39086 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms