Protein–RNA interactions for Protein: P35609

ACTN2, Alpha-actinin-2, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN2P35609 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN2P35609 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ACTN2P35609 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.79■□□□□ 0.6
ACTN2P35609 PHGDH-209ENST00000641074 1780 ntBASIC18.79■□□□□ 0.6
ACTN2P35609 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN2P35609 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ACTN2P35609 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.79■□□□□ 0.6
ACTN2P35609 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.79■□□□□ 0.6
ACTN2P35609 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.79■□□□□ 0.6
ACTN2P35609 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ACTN2P35609 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.79■□□□□ 0.6
ACTN2P35609 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN2P35609 CR769767.2-201ENST00000622735 460 ntBASIC18.79■□□□□ 0.6
ACTN2P35609 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN2P35609 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.79■□□□□ 0.6
ACTN2P35609 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN2P35609 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN2P35609 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.79■□□□□ 0.6
ACTN2P35609 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN2P35609 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN2P35609 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.79■□□□□ 0.6
ACTN2P35609 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN2P35609 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN2P35609 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN2P35609 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ACTN2P35609 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTN2P35609 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.78■□□□□ 0.6
ACTN2P35609 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.78■□□□□ 0.6
ACTN2P35609 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ACTN2P35609 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTN2P35609 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ACTN2P35609 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ACTN2P35609 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTN2P35609 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.78■□□□□ 0.6
ACTN2P35609 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.78■□□□□ 0.6
ACTN2P35609 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTN2P35609 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ACTN2P35609 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ACTN2P35609 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ACTN2P35609 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ACTN2P35609 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.78■□□□□ 0.6
ACTN2P35609 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.78■□□□□ 0.6
ACTN2P35609 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.78■□□□□ 0.6
ACTN2P35609 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.78■□□□□ 0.6
ACTN2P35609 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ACTN2P35609 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTN2P35609 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTN2P35609 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTN2P35609 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTN2P35609 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ACTN2P35609 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTN2P35609 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN2P35609 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN2P35609 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN2P35609 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ACTN2P35609 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN2P35609 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN2P35609 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.77■□□□□ 0.6
ACTN2P35609 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN2P35609 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN2P35609 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.77■□□□□ 0.6
ACTN2P35609 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN2P35609 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN2P35609 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN2P35609 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
ACTN2P35609 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.77■□□□□ 0.6
ACTN2P35609 TPM4P1-201ENST00000436100 807 ntBASIC18.77■□□□□ 0.6
ACTN2P35609 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN2P35609 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN2P35609 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.77■□□□□ 0.6
ACTN2P35609 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.77■□□□□ 0.6
ACTN2P35609 KRT18P56-201ENST00000507275 550 ntBASIC18.77■□□□□ 0.6
ACTN2P35609 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.77■□□□□ 0.6
ACTN2P35609 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.77■□□□□ 0.6
ACTN2P35609 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
ACTN2P35609 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.77■□□□□ 0.6
ACTN2P35609 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.77■□□□□ 0.6
ACTN2P35609 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.77■□□□□ 0.6
ACTN2P35609 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN2P35609 AC112497.1-201ENST00000624824 639 ntBASIC18.77■□□□□ 0.6
ACTN2P35609 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.77■□□□□ 0.6
ACTN2P35609 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN2P35609 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.77■□□□□ 0.6
ACTN2P35609 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN2P35609 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.77■□□□□ 0.6
ACTN2P35609 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ACTN2P35609 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN2P35609 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN2P35609 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ACTN2P35609 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN2P35609 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.77■□□□□ 0.6
ACTN2P35609 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
ACTN2P35609 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.77■□□□□ 0.6
ACTN2P35609 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
ACTN2P35609 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
ACTN2P35609 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ACTN2P35609 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ACTN2P35609 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
ACTN2P35609 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ACTN2P35609 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms