Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A4P31645 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SLC6A4P31645 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
SLC6A4P31645 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A4P31645 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A4P31645 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SLC6A4P31645 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A4P31645 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A4P31645 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SLC6A4P31645 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC6A4P31645 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A4P31645 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A4P31645 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A4P31645 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC6A4P31645 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A4P31645 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A4P31645 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A4P31645 RPS2P28-201ENST00000314255 741 ntBASIC17.99■□□□□ 0.47
SLC6A4P31645 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A4P31645 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.99■□□□□ 0.47
SLC6A4P31645 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.99■□□□□ 0.47
SLC6A4P31645 AC092910.1-201ENST00000482027 1129 ntBASIC17.99■□□□□ 0.47
SLC6A4P31645 AC093909.1-201ENST00000504731 1122 ntBASIC17.99■□□□□ 0.47
SLC6A4P31645 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC6A4P31645 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SLC6A4P31645 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC6A4P31645 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.99■□□□□ 0.47
SLC6A4P31645 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC6A4P31645 AL133373.2-201ENST00000623187 2828 ntBASIC17.99■□□□□ 0.47
SLC6A4P31645 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A4P31645 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A4P31645 NOC2LP2-201ENST00000407594 1944 ntBASIC17.99■□□□□ 0.47
SLC6A4P31645 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A4P31645 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A4P31645 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A4P31645 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC6A4P31645 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A4P31645 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A4P31645 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC6A4P31645 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A4P31645 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC6A4P31645 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A4P31645 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SLC6A4P31645 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC6A4P31645 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A4P31645 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SLC6A4P31645 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
SLC6A4P31645 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A4P31645 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A4P31645 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC6A4P31645 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC6A4P31645 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC6A4P31645 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.98■□□□□ 0.47
SLC6A4P31645 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC6A4P31645 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SLC6A4P31645 AL139327.4-201ENST00000612362 153 ntBASIC17.98■□□□□ 0.47
SLC6A4P31645 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.98■□□□□ 0.47
SLC6A4P31645 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A4P31645 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
SLC6A4P31645 AC068880.1-201ENST00000507289 2297 ntBASIC17.98■□□□□ 0.47
SLC6A4P31645 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC6A4P31645 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A4P31645 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A4P31645 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A4P31645 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC6A4P31645 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC6A4P31645 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A4P31645 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A4P31645 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A4P31645 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A4P31645 AC067852.2-201ENST00000590513 2313 ntBASIC17.97■□□□□ 0.47
SLC6A4P31645 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A4P31645 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC6A4P31645 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A4P31645 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC6A4P31645 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.97■□□□□ 0.47
SLC6A4P31645 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC6A4P31645 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A4P31645 KRT18P27-201ENST00000427733 1299 ntBASIC17.97■□□□□ 0.47
SLC6A4P31645 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.97■□□□□ 0.47
SLC6A4P31645 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC6A4P31645 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC6A4P31645 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC6A4P31645 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC6A4P31645 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC6A4P31645 AC105339.3-201ENST00000560043 636 ntBASIC17.97■□□□□ 0.47
SLC6A4P31645 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC6A4P31645 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SLC6A4P31645 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC6A4P31645 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A4P31645 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC6A4P31645 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC6A4P31645 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.97■□□□□ 0.47
SLC6A4P31645 AL589182.2-201ENST00000619332 1049 ntBASIC17.97■□□□□ 0.47
SLC6A4P31645 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A4P31645 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A4P31645 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A4P31645 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A4P31645 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC6A4P31645 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms