Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 TSPY12P-201ENST00000421279 868 ntBASIC16.66■□□□□ 0.26
PTPN6P29350 KRT18P48-201ENST00000434763 852 ntBASIC16.66■□□□□ 0.26
PTPN6P29350 AC011498.5-201ENST00000592027 486 ntBASIC16.66■□□□□ 0.26
PTPN6P29350 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN6P29350 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PTPN6P29350 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN6P29350 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PTPN6P29350 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN6P29350 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN6P29350 AC060834.1-201ENST00000443027 2032 ntBASIC16.65■□□□□ 0.26
PTPN6P29350 AC106886.4-201ENST00000623557 2502 ntBASIC16.65■□□□□ 0.26
PTPN6P29350 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN6P29350 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
PTPN6P29350 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN6P29350 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN6P29350 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.65■□□□□ 0.26
PTPN6P29350 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN6P29350 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN6P29350 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.65■□□□□ 0.26
PTPN6P29350 SLC25A1P3-201ENST00000395415 828 ntBASIC16.65■□□□□ 0.26
PTPN6P29350 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN6P29350 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.65■□□□□ 0.26
PTPN6P29350 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.65■□□□□ 0.26
PTPN6P29350 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN6P29350 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.65■□□□□ 0.26
PTPN6P29350 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN6P29350 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PTPN6P29350 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN6P29350 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN6P29350 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN6P29350 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.65■□□□□ 0.26
PTPN6P29350 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN6P29350 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN6P29350 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN6P29350 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN6P29350 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN6P29350 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PTPN6P29350 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN6P29350 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.64■□□□□ 0.25
PTPN6P29350 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
PTPN6P29350 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN6P29350 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PTPN6P29350 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.64■□□□□ 0.25
PTPN6P29350 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN6P29350 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PTPN6P29350 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN6P29350 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN6P29350 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN6P29350 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PTPN6P29350 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN6P29350 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN6P29350 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.64■□□□□ 0.25
PTPN6P29350 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN6P29350 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PTPN6P29350 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.64■□□□□ 0.25
PTPN6P29350 AC068472.1-201ENST00000474589 881 ntBASIC16.64■□□□□ 0.25
PTPN6P29350 AP003733.1-201ENST00000491725 852 ntBASIC16.64■□□□□ 0.25
PTPN6P29350 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN6P29350 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
PTPN6P29350 RNF126P1-202ENST00000569893 925 ntBASIC16.64■□□□□ 0.25
PTPN6P29350 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.64■□□□□ 0.25
PTPN6P29350 AC069148.1-201ENST00000608741 768 ntBASIC16.64■□□□□ 0.25
PTPN6P29350 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PTPN6P29350 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN6P29350 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.64■□□□□ 0.25
PTPN6P29350 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN6P29350 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PTPN6P29350 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN6P29350 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN6P29350 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN6P29350 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN6P29350 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN6P29350 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN6P29350 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN6P29350 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN6P29350 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.64■□□□□ 0.25
PTPN6P29350 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PTPN6P29350 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN6P29350 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN6P29350 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
PTPN6P29350 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
PTPN6P29350 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
PTPN6P29350 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN6P29350 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
PTPN6P29350 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN6P29350 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN6P29350 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN6P29350 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN6P29350 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms