Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.18■□□□□ 0.18
ABCD3P28288 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD3P28288 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD3P28288 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ABCD3P28288 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.18■□□□□ 0.18
ABCD3P28288 AC004870.1-201ENST00000315132 882 ntBASIC16.18■□□□□ 0.18
ABCD3P28288 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD3P28288 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD3P28288 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD3P28288 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ABCD3P28288 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.18■□□□□ 0.18
ABCD3P28288 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.18■□□□□ 0.18
ABCD3P28288 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.18■□□□□ 0.18
ABCD3P28288 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.18■□□□□ 0.18
ABCD3P28288 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
ABCD3P28288 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD3P28288 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.18■□□□□ 0.18
ABCD3P28288 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
ABCD3P28288 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ABCD3P28288 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.18■□□□□ 0.18
ABCD3P28288 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD3P28288 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.18■□□□□ 0.18
ABCD3P28288 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.18■□□□□ 0.18
ABCD3P28288 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.18■□□□□ 0.18
ABCD3P28288 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ABCD3P28288 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD3P28288 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD3P28288 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
ABCD3P28288 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD3P28288 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD3P28288 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
ABCD3P28288 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.18■□□□□ 0.18
ABCD3P28288 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD3P28288 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD3P28288 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.18■□□□□ 0.18
ABCD3P28288 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD3P28288 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.18■□□□□ 0.18
ABCD3P28288 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD3P28288 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD3P28288 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD3P28288 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.17■□□□□ 0.18
ABCD3P28288 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD3P28288 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.17■□□□□ 0.18
ABCD3P28288 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD3P28288 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
ABCD3P28288 AC132938.5-201ENST00000624980 1813 ntBASIC16.17■□□□□ 0.18
ABCD3P28288 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD3P28288 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.17■□□□□ 0.18
ABCD3P28288 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD3P28288 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.17■□□□□ 0.18
ABCD3P28288 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ABCD3P28288 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD3P28288 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.17■□□□□ 0.18
ABCD3P28288 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.17■□□□□ 0.18
ABCD3P28288 AF238378.1-201ENST00000526806 358 ntBASIC16.17■□□□□ 0.18
ABCD3P28288 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.17■□□□□ 0.18
ABCD3P28288 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.17■□□□□ 0.18
ABCD3P28288 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.17■□□□□ 0.18
ABCD3P28288 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD3P28288 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.17■□□□□ 0.18
ABCD3P28288 MTDHP3-201ENST00000594186 672 ntBASIC16.17■□□□□ 0.18
ABCD3P28288 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD3P28288 AC008608.2-201ENST00000606089 416 ntBASIC16.17■□□□□ 0.18
ABCD3P28288 AL355877.3-201ENST00000622820 899 ntBASIC16.17■□□□□ 0.18
ABCD3P28288 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD3P28288 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD3P28288 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.17■□□□□ 0.18
ABCD3P28288 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD3P28288 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
ABCD3P28288 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD3P28288 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD3P28288 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD3P28288 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.16■□□□□ 0.18
ABCD3P28288 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ABCD3P28288 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ABCD3P28288 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ABCD3P28288 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
ABCD3P28288 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
ABCD3P28288 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.16■□□□□ 0.18
ABCD3P28288 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ABCD3P28288 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ABCD3P28288 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.16■□□□□ 0.18
ABCD3P28288 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.16■□□□□ 0.18
ABCD3P28288 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ABCD3P28288 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ABCD3P28288 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.16■□□□□ 0.18
ABCD3P28288 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.16■□□□□ 0.18
ABCD3P28288 KLF4P1-201ENST00000412782 1185 ntBASIC16.16■□□□□ 0.18
ABCD3P28288 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.16■□□□□ 0.18
ABCD3P28288 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.16■□□□□ 0.18
ABCD3P28288 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.16■□□□□ 0.18
ABCD3P28288 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ABCD3P28288 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.16■□□□□ 0.18
ABCD3P28288 STK25P1-201ENST00000585406 838 ntBASIC16.16■□□□□ 0.18
ABCD3P28288 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.16■□□□□ 0.18
ABCD3P28288 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ABCD3P28288 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.16■□□□□ 0.18
ABCD3P28288 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ABCD3P28288 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ABCD3P28288 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms