Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.31■□□□□ 0.36
VARSP26640 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VARSP26640 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.31■□□□□ 0.36
VARSP26640 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VARSP26640 AL390719.2-201ENST00000606993 987 ntBASIC17.31■□□□□ 0.36
VARSP26640 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.31■□□□□ 0.36
VARSP26640 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VARSP26640 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VARSP26640 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VARSP26640 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VARSP26640 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VARSP26640 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
VARSP26640 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.31■□□□□ 0.36
VARSP26640 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VARSP26640 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VARSP26640 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VARSP26640 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.3■□□□□ 0.36
VARSP26640 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.3■□□□□ 0.36
VARSP26640 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.3■□□□□ 0.36
VARSP26640 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARSP26640 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VARSP26640 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VARSP26640 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARSP26640 AC022898.2-201ENST00000616822 1312 ntBASIC17.3■□□□□ 0.36
VARSP26640 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VARSP26640 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.3■□□□□ 0.36
VARSP26640 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARSP26640 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARSP26640 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARSP26640 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.3■□□□□ 0.36
VARSP26640 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.3■□□□□ 0.36
VARSP26640 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VARSP26640 AC092329.2-201ENST00000598402 547 ntBASIC17.3■□□□□ 0.36
VARSP26640 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.3■□□□□ 0.36
VARSP26640 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARSP26640 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
VARSP26640 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARSP26640 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.3■□□□□ 0.36
VARSP26640 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARSP26640 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
VARSP26640 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.3■□□□□ 0.36
VARSP26640 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.3■□□□□ 0.36
VARSP26640 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.3■□□□□ 0.36
VARSP26640 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.3■□□□□ 0.36
VARSP26640 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.29■□□□□ 0.36
VARSP26640 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.29■□□□□ 0.36
VARSP26640 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.29■□□□□ 0.36
VARSP26640 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VARSP26640 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARSP26640 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARSP26640 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
VARSP26640 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.29■□□□□ 0.36
VARSP26640 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARSP26640 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VARSP26640 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VARSP26640 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARSP26640 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARSP26640 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.29■□□□□ 0.36
VARSP26640 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.29■□□□□ 0.36
VARSP26640 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.29■□□□□ 0.36
VARSP26640 NIFKP4-201ENST00000567275 1192 ntBASIC17.29■□□□□ 0.36
VARSP26640 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
VARSP26640 AL121672.3-201ENST00000608644 468 ntBASIC17.29■□□□□ 0.36
VARSP26640 AC009154.2-201ENST00000621177 724 ntBASIC17.29■□□□□ 0.36
VARSP26640 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARSP26640 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.29■□□□□ 0.36
VARSP26640 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VARSP26640 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VARSP26640 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VARSP26640 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARSP26640 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
VARSP26640 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARSP26640 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VARSP26640 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.29■□□□□ 0.36
VARSP26640 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARSP26640 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.29■□□□□ 0.36
VARSP26640 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARSP26640 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARSP26640 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARSP26640 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARSP26640 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.28■□□□□ 0.36
VARSP26640 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARSP26640 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARSP26640 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.28■□□□□ 0.36
VARSP26640 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VARSP26640 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.28■□□□□ 0.36
VARSP26640 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARSP26640 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
VARSP26640 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARSP26640 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.28■□□□□ 0.36
VARSP26640 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.28■□□□□ 0.36
VARSP26640 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.28■□□□□ 0.36
VARSP26640 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.28■□□□□ 0.36
VARSP26640 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.28■□□□□ 0.36
VARSP26640 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARSP26640 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARSP26640 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARSP26640 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARSP26640 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.28■□□□□ 0.36
VARSP26640 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms