Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINGO3P0C6S8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINGO3P0C6S8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 KRT18P22-201ENST00000402024 1347 ntBASIC17.03■□□□□ 0.32
LINGO3P0C6S8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.03■□□□□ 0.32
LINGO3P0C6S8 ECEL1P2-202ENST00000465689 757 ntBASIC17.03■□□□□ 0.32
LINGO3P0C6S8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINGO3P0C6S8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
LINGO3P0C6S8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINGO3P0C6S8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINGO3P0C6S8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.02■□□□□ 0.32
LINGO3P0C6S8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINGO3P0C6S8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINGO3P0C6S8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.02■□□□□ 0.32
LINGO3P0C6S8 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LINGO3P0C6S8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LINGO3P0C6S8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.02■□□□□ 0.32
LINGO3P0C6S8 MIR564-202ENST00000385049 94 ntBASIC17.02■□□□□ 0.32
LINGO3P0C6S8 AC211429.1-201ENST00000415277 523 ntBASIC17.02■□□□□ 0.32
LINGO3P0C6S8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.02■□□□□ 0.32
LINGO3P0C6S8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LINGO3P0C6S8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINGO3P0C6S8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.02■□□□□ 0.32
LINGO3P0C6S8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LINGO3P0C6S8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.02■□□□□ 0.32
LINGO3P0C6S8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.02■□□□□ 0.32
LINGO3P0C6S8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
LINGO3P0C6S8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LINGO3P0C6S8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINGO3P0C6S8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.02■□□□□ 0.32
LINGO3P0C6S8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.02■□□□□ 0.32
LINGO3P0C6S8 KRT8P45-201ENST00000414328 1447 ntBASIC17.02■□□□□ 0.31
LINGO3P0C6S8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINGO3P0C6S8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.02■□□□□ 0.31
LINGO3P0C6S8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINGO3P0C6S8 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINGO3P0C6S8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.02■□□□□ 0.31
LINGO3P0C6S8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.02■□□□□ 0.31
LINGO3P0C6S8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINGO3P0C6S8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINGO3P0C6S8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.02■□□□□ 0.31
LINGO3P0C6S8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINGO3P0C6S8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LINGO3P0C6S8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms