Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
SRPRAP08240 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SRPRAP08240 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.7■□□□□ 0.42
SRPRAP08240 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SRPRAP08240 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRPRAP08240 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRPRAP08240 AC097637.2-201ENST00000624096 1997 ntBASIC17.7■□□□□ 0.42
SRPRAP08240 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRPRAP08240 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SRPRAP08240 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.69■□□□□ 0.42
SRPRAP08240 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SRPRAP08240 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.69■□□□□ 0.42
SRPRAP08240 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.69■□□□□ 0.42
SRPRAP08240 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SRPRAP08240 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.69■□□□□ 0.42
SRPRAP08240 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.69■□□□□ 0.42
SRPRAP08240 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.69■□□□□ 0.42
SRPRAP08240 AC009947.1-201ENST00000444350 727 ntBASIC17.69■□□□□ 0.42
SRPRAP08240 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.69■□□□□ 0.42
SRPRAP08240 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRPRAP08240 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.69■□□□□ 0.42
SRPRAP08240 AC023511.2-201ENST00000618803 211 ntBASIC17.69■□□□□ 0.42
SRPRAP08240 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SRPRAP08240 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRPRAP08240 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRPRAP08240 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
SRPRAP08240 AC006504.4-201ENST00000592118 1568 ntBASIC17.69■□□□□ 0.42
SRPRAP08240 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SRPRAP08240 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRPRAP08240 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.69■□□□□ 0.42
SRPRAP08240 PMS2P7-201ENST00000506558 1336 ntBASIC17.69■□□□□ 0.42
SRPRAP08240 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.69■□□□□ 0.42
SRPRAP08240 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.69■□□□□ 0.42
SRPRAP08240 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRPRAP08240 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SRPRAP08240 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRPRAP08240 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRPRAP08240 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SRPRAP08240 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SRPRAP08240 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SRPRAP08240 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRPRAP08240 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRPRAP08240 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRPRAP08240 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRPRAP08240 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRPRAP08240 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRPRAP08240 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRPRAP08240 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRPRAP08240 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.68■□□□□ 0.42
SRPRAP08240 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRPRAP08240 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRPRAP08240 ELK2BP-201ENST00000415014 1224 ntBASIC17.68■□□□□ 0.42
SRPRAP08240 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRPRAP08240 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.68■□□□□ 0.42
SRPRAP08240 POLD2P1-201ENST00000511220 997 ntBASIC17.68■□□□□ 0.42
SRPRAP08240 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.68■□□□□ 0.42
SRPRAP08240 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.68■□□□□ 0.42
SRPRAP08240 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
SRPRAP08240 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.68■□□□□ 0.42
SRPRAP08240 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.68■□□□□ 0.42
SRPRAP08240 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.68■□□□□ 0.42
SRPRAP08240 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRPRAP08240 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.68■□□□□ 0.42
SRPRAP08240 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRPRAP08240 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRPRAP08240 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SRPRAP08240 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SRPRAP08240 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRPRAP08240 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRPRAP08240 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRPRAP08240 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRPRAP08240 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.68■□□□□ 0.42
SRPRAP08240 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.68■□□□□ 0.42
SRPRAP08240 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.68■□□□□ 0.42
SRPRAP08240 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.67■□□□□ 0.42
SRPRAP08240 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRPRAP08240 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SRPRAP08240 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRPRAP08240 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SRPRAP08240 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRPRAP08240 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRPRAP08240 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.67■□□□□ 0.42
SRPRAP08240 AC006116.8-202ENST00000587620 1550 ntBASIC17.67■□□□□ 0.42
SRPRAP08240 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRPRAP08240 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRPRAP08240 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRPRAP08240 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRPRAP08240 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.67■□□□□ 0.42
SRPRAP08240 ACTG1P4-201ENST00000425123 1122 ntBASIC17.67■□□□□ 0.42
SRPRAP08240 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
SRPRAP08240 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRPRAP08240 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SRPRAP08240 AC140113.2-201ENST00000604370 208 ntBASIC17.67■□□□□ 0.42
SRPRAP08240 AL353135.1-201ENST00000606729 504 ntBASIC17.67■□□□□ 0.42
SRPRAP08240 AL139327.4-201ENST00000612362 153 ntBASIC17.67■□□□□ 0.42
SRPRAP08240 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.67■□□□□ 0.42
SRPRAP08240 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SRPRAP08240 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRPRAP08240 GPR89P-201ENST00000407924 1495 ntBASIC17.67■□□□□ 0.42
SRPRAP08240 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms