Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC069262.1-201ENST00000539058 672 ntBASIC18.45■□□□□ 0.54
RB1P06400 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.45■□□□□ 0.54
RB1P06400 AC093520.2-201ENST00000561830 333 ntBASIC18.45■□□□□ 0.54
RB1P06400 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.45■□□□□ 0.54
RB1P06400 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RB1P06400 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RB1P06400 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RB1P06400 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RB1P06400 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RB1P06400 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RB1P06400 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RB1P06400 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.45■□□□□ 0.54
RB1P06400 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RB1P06400 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RB1P06400 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RB1P06400 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RB1P06400 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RB1P06400 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.44■□□□□ 0.54
RB1P06400 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RB1P06400 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.44■□□□□ 0.54
RB1P06400 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RB1P06400 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RB1P06400 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RB1P06400 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RB1P06400 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.44■□□□□ 0.54
RB1P06400 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RB1P06400 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RB1P06400 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RB1P06400 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RB1P06400 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RB1P06400 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RB1P06400 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RB1P06400 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.44■□□□□ 0.54
RB1P06400 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.44■□□□□ 0.54
RB1P06400 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.44■□□□□ 0.54
RB1P06400 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.44■□□□□ 0.54
RB1P06400 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RB1P06400 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.44■□□□□ 0.54
RB1P06400 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.44■□□□□ 0.54
RB1P06400 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.44■□□□□ 0.54
RB1P06400 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.44■□□□□ 0.54
RB1P06400 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RB1P06400 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RB1P06400 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RB1P06400 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RB1P06400 AC100803.2-201ENST00000562459 1963 ntBASIC18.44■□□□□ 0.54
RB1P06400 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RB1P06400 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RB1P06400 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RB1P06400 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RB1P06400 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.43■□□□□ 0.54
RB1P06400 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RB1P06400 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RB1P06400 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RB1P06400 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RB1P06400 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RB1P06400 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
RB1P06400 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RB1P06400 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RB1P06400 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.43■□□□□ 0.54
RB1P06400 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
RB1P06400 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.43■□□□□ 0.54
RB1P06400 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.43■□□□□ 0.54
RB1P06400 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RB1P06400 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.43■□□□□ 0.54
RB1P06400 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.43■□□□□ 0.54
RB1P06400 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
RB1P06400 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.43■□□□□ 0.54
RB1P06400 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RB1P06400 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.43■□□□□ 0.54
RB1P06400 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.43■□□□□ 0.54
RB1P06400 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
RB1P06400 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.43■□□□□ 0.54
RB1P06400 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RB1P06400 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.43■□□□□ 0.54
RB1P06400 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RB1P06400 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RB1P06400 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RB1P06400 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
RB1P06400 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
RB1P06400 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RB1P06400 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RB1P06400 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RB1P06400 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RB1P06400 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RB1P06400 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RB1P06400 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RB1P06400 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RB1P06400 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RB1P06400 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RB1P06400 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.42■□□□□ 0.54
RB1P06400 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.42■□□□□ 0.54
RB1P06400 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.42■□□□□ 0.54
RB1P06400 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RB1P06400 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.42■□□□□ 0.54
RB1P06400 AL355306.1-201ENST00000415580 579 ntBASIC18.42■□□□□ 0.54
RB1P06400 AC005237.2-201ENST00000434368 219 ntBASIC18.42■□□□□ 0.54
RB1P06400 CNN2P2-201ENST00000443536 909 ntBASIC18.42■□□□□ 0.54
RB1P06400 CNN2P3-201ENST00000450201 906 ntBASIC18.42■□□□□ 0.54
RB1P06400 SPDYE11-202ENST00000450699 704 ntBASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms