Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 LINC01311-201ENST00000565162 1445 ntBASIC15.93■□□□□ 0.14
HMGN1P05114 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.93■□□□□ 0.14
HMGN1P05114 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
HMGN1P05114 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HMGN1P05114 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGN1P05114 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
HMGN1P05114 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 CYP2D8P-201ENST00000433633 1490 ntBASIC15.92■□□□□ 0.14
HMGN1P05114 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGN1P05114 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGN1P05114 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HMGN1P05114 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGN1P05114 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGN1P05114 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.92■□□□□ 0.14
HMGN1P05114 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 AC112698.1-201ENST00000510299 916 ntBASIC15.92■□□□□ 0.14
HMGN1P05114 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGN1P05114 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HMGN1P05114 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 AC010947.1-201ENST00000623454 693 ntBASIC15.92■□□□□ 0.14
HMGN1P05114 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
HMGN1P05114 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HMGN1P05114 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HMGN1P05114 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HMGN1P05114 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGN1P05114 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGN1P05114 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HMGN1P05114 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HMGN1P05114 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGN1P05114 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.91■□□□□ 0.14
HMGN1P05114 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGN1P05114 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGN1P05114 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGN1P05114 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HMGN1P05114 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HMGN1P05114 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGN1P05114 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGN1P05114 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGN1P05114 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGN1P05114 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HMGN1P05114 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
HMGN1P05114 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
HMGN1P05114 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGN1P05114 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGN1P05114 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGN1P05114 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGN1P05114 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HMGN1P05114 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGN1P05114 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGN1P05114 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGN1P05114 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGN1P05114 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.91■□□□□ 0.14
HMGN1P05114 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGN1P05114 TSPY12P-201ENST00000421279 868 ntBASIC15.91■□□□□ 0.14
HMGN1P05114 ECEL1P3-201ENST00000427961 737 ntBASIC15.91■□□□□ 0.14
HMGN1P05114 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGN1P05114 ECEL1P2-202ENST00000465689 757 ntBASIC15.91■□□□□ 0.14
HMGN1P05114 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.91■□□□□ 0.14
HMGN1P05114 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.91■□□□□ 0.14
HMGN1P05114 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGN1P05114 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGN1P05114 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.91■□□□□ 0.14
HMGN1P05114 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGN1P05114 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGN1P05114 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGN1P05114 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGN1P05114 AC116353.5-201ENST00000638148 1699 ntBASIC15.91■□□□□ 0.14
HMGN1P05114 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGN1P05114 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
HMGN1P05114 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
HMGN1P05114 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGN1P05114 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGN1P05114 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms