Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.82■□□□□ 0.6
TIMP1P01033 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TIMP1P01033 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
TIMP1P01033 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TIMP1P01033 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.82■□□□□ 0.6
TIMP1P01033 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TIMP1P01033 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.82■□□□□ 0.6
TIMP1P01033 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TIMP1P01033 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.82■□□□□ 0.6
TIMP1P01033 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.82■□□□□ 0.6
TIMP1P01033 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.82■□□□□ 0.6
TIMP1P01033 SPCS2P4-201ENST00000436160 681 ntBASIC18.82■□□□□ 0.6
TIMP1P01033 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TIMP1P01033 IGHV3-42-201ENST00000520410 361 ntBASIC18.82■□□□□ 0.6
TIMP1P01033 AP005018.1-201ENST00000525475 301 ntBASIC18.82■□□□□ 0.6
TIMP1P01033 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.82■□□□□ 0.6
TIMP1P01033 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TIMP1P01033 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.82■□□□□ 0.6
TIMP1P01033 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.82■□□□□ 0.6
TIMP1P01033 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.82■□□□□ 0.6
TIMP1P01033 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
TIMP1P01033 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
TIMP1P01033 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TIMP1P01033 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TIMP1P01033 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
TIMP1P01033 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TIMP1P01033 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TIMP1P01033 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMP1P01033 AC008677.1-201ENST00000519230 1561 ntBASIC18.81■□□□□ 0.6
TIMP1P01033 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.81■□□□□ 0.6
TIMP1P01033 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TIMP1P01033 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMP1P01033 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMP1P01033 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.81■□□□□ 0.6
TIMP1P01033 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMP1P01033 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TIMP1P01033 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
TIMP1P01033 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.81■□□□□ 0.6
TIMP1P01033 AL512638.1-201ENST00000457493 794 ntBASIC18.81■□□□□ 0.6
TIMP1P01033 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TIMP1P01033 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.81■□□□□ 0.6
TIMP1P01033 AC026150.2-201ENST00000564693 1156 ntBASIC18.81■□□□□ 0.6
TIMP1P01033 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMP1P01033 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.81■□□□□ 0.6
TIMP1P01033 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMP1P01033 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TIMP1P01033 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TIMP1P01033 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMP1P01033 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TIMP1P01033 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TIMP1P01033 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
TIMP1P01033 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMP1P01033 AL135999.2-201ENST00000622438 1686 ntBASIC18.8■□□□□ 0.6
TIMP1P01033 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
TIMP1P01033 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TIMP1P01033 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.8■□□□□ 0.6
TIMP1P01033 SPDYE7P-202ENST00000420373 878 ntBASIC18.8■□□□□ 0.6
TIMP1P01033 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMP1P01033 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMP1P01033 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMP1P01033 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.8■□□□□ 0.6
TIMP1P01033 AL158211.3-201ENST00000607385 239 ntBASIC18.8■□□□□ 0.6
TIMP1P01033 AL161645.1-201ENST00000622716 1255 ntBASIC18.8■□□□□ 0.6
TIMP1P01033 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.8■□□□□ 0.6
TIMP1P01033 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.8■□□□□ 0.6
TIMP1P01033 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.8■□□□□ 0.6
TIMP1P01033 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMP1P01033 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TIMP1P01033 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TIMP1P01033 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP1P01033 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP1P01033 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP1P01033 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.79■□□□□ 0.6
TIMP1P01033 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.79■□□□□ 0.6
TIMP1P01033 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP1P01033 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP1P01033 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP1P01033 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP1P01033 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
TIMP1P01033 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.79■□□□□ 0.6
TIMP1P01033 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP1P01033 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP1P01033 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
TIMP1P01033 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP1P01033 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP1P01033 IGHV3-62-201ENST00000520057 340 ntBASIC18.79■□□□□ 0.6
TIMP1P01033 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.79■□□□□ 0.6
TIMP1P01033 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.79■□□□□ 0.6
TIMP1P01033 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.79■□□□□ 0.6
TIMP1P01033 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP1P01033 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.79■□□□□ 0.6
TIMP1P01033 KRT8P23-201ENST00000560090 1207 ntBASIC18.79■□□□□ 0.6
TIMP1P01033 LINC01225-203ENST00000563550 1244 ntBASIC18.79■□□□□ 0.6
TIMP1P01033 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.79■□□□□ 0.6
TIMP1P01033 MIR4515-201ENST00000584082 81 ntBASIC18.79■□□□□ 0.6
TIMP1P01033 AL008721.1-201ENST00000609964 604 ntBASIC18.79■□□□□ 0.6
TIMP1P01033 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TIMP1P01033 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.79■□□□□ 0.6
TIMP1P01033 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP1P01033 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms