Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
GGPS1O95749 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GGPS1O95749 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.68■□□□□ 0.74
GGPS1O95749 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GGPS1O95749 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GGPS1O95749 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GGPS1O95749 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
GGPS1O95749 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.68■□□□□ 0.74
GGPS1O95749 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
GGPS1O95749 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.68■□□□□ 0.74
GGPS1O95749 MIR1233-2-201ENST00000408138 82 ntBASIC19.68■□□□□ 0.74
GGPS1O95749 MIR1233-1-201ENST00000408722 82 ntBASIC19.68■□□□□ 0.74
GGPS1O95749 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.68■□□□□ 0.74
GGPS1O95749 AC002558.1-201ENST00000488906 803 ntBASIC19.68■□□□□ 0.74
GGPS1O95749 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GGPS1O95749 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.68■□□□□ 0.74
GGPS1O95749 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
GGPS1O95749 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.68■□□□□ 0.74
GGPS1O95749 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GGPS1O95749 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GGPS1O95749 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.68■□□□□ 0.74
GGPS1O95749 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.68■□□□□ 0.74
GGPS1O95749 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
GGPS1O95749 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.68■□□□□ 0.74
GGPS1O95749 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.68■□□□□ 0.74
GGPS1O95749 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GGPS1O95749 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
GGPS1O95749 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
GGPS1O95749 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.67■□□□□ 0.74
GGPS1O95749 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
GGPS1O95749 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GGPS1O95749 AC009336.1-201ENST00000608941 1553 ntBASIC19.67■□□□□ 0.74
GGPS1O95749 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GGPS1O95749 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GGPS1O95749 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GGPS1O95749 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
GGPS1O95749 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GGPS1O95749 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.67■□□□□ 0.74
GGPS1O95749 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.67■□□□□ 0.74
GGPS1O95749 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.67■□□□□ 0.74
GGPS1O95749 RNA5SP416-201ENST00000516838 111 ntBASIC19.67■□□□□ 0.74
GGPS1O95749 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.67■□□□□ 0.74
GGPS1O95749 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.67■□□□□ 0.74
GGPS1O95749 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.67■□□□□ 0.74
GGPS1O95749 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.67■□□□□ 0.74
GGPS1O95749 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.67■□□□□ 0.74
GGPS1O95749 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
GGPS1O95749 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GGPS1O95749 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GGPS1O95749 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GGPS1O95749 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.67■□□□□ 0.74
GGPS1O95749 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
GGPS1O95749 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
GGPS1O95749 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
GGPS1O95749 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
GGPS1O95749 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GGPS1O95749 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.66■□□□□ 0.74
GGPS1O95749 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GGPS1O95749 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GGPS1O95749 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GGPS1O95749 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GGPS1O95749 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GGPS1O95749 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GGPS1O95749 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.66■□□□□ 0.74
GGPS1O95749 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GGPS1O95749 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GGPS1O95749 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.66■□□□□ 0.74
GGPS1O95749 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
GGPS1O95749 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.66■□□□□ 0.74
GGPS1O95749 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.66■□□□□ 0.74
GGPS1O95749 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.66■□□□□ 0.74
GGPS1O95749 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GGPS1O95749 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.66■□□□□ 0.74
GGPS1O95749 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.66■□□□□ 0.74
GGPS1O95749 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.66■□□□□ 0.74
GGPS1O95749 AC138028.4-201ENST00000564984 1845 ntBASIC19.66■□□□□ 0.74
GGPS1O95749 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GGPS1O95749 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GGPS1O95749 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
GGPS1O95749 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.66■□□□□ 0.74
GGPS1O95749 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GGPS1O95749 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GGPS1O95749 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
GGPS1O95749 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GGPS1O95749 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.65■□□□□ 0.74
GGPS1O95749 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.65■□□□□ 0.74
GGPS1O95749 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GGPS1O95749 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.65■□□□□ 0.74
GGPS1O95749 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GGPS1O95749 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
GGPS1O95749 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.65■□□□□ 0.74
GGPS1O95749 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
GGPS1O95749 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GGPS1O95749 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.65■□□□□ 0.74
GGPS1O95749 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
GGPS1O95749 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.65■□□□□ 0.74
GGPS1O95749 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.65■□□□□ 0.74
GGPS1O95749 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
GGPS1O95749 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.65■□□□□ 0.74
GGPS1O95749 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms