Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VAPBO95292 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VAPBO95292 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VAPBO95292 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VAPBO95292 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VAPBO95292 COX5BP2-201ENST00000392354 334 ntBASIC17.66■□□□□ 0.42
VAPBO95292 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.66■□□□□ 0.42
VAPBO95292 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.66■□□□□ 0.42
VAPBO95292 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VAPBO95292 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
VAPBO95292 KRT8P26-201ENST00000534154 1276 ntBASIC17.66■□□□□ 0.42
VAPBO95292 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.66■□□□□ 0.42
VAPBO95292 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.66■□□□□ 0.42
VAPBO95292 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
VAPBO95292 AL121956.5-201ENST00000625261 221 ntBASIC17.66■□□□□ 0.42
VAPBO95292 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.66■□□□□ 0.42
VAPBO95292 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.66■□□□□ 0.42
VAPBO95292 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VAPBO95292 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VAPBO95292 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VAPBO95292 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VAPBO95292 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
VAPBO95292 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.66■□□□□ 0.42
VAPBO95292 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
VAPBO95292 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VAPBO95292 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VAPBO95292 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VAPBO95292 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VAPBO95292 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.66■□□□□ 0.42
VAPBO95292 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VAPBO95292 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
VAPBO95292 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VAPBO95292 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.65■□□□□ 0.42
VAPBO95292 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VAPBO95292 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VAPBO95292 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VAPBO95292 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
VAPBO95292 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VAPBO95292 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VAPBO95292 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VAPBO95292 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VAPBO95292 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
VAPBO95292 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
VAPBO95292 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.65■□□□□ 0.42
VAPBO95292 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.65■□□□□ 0.42
VAPBO95292 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VAPBO95292 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.65■□□□□ 0.42
VAPBO95292 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
VAPBO95292 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VAPBO95292 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
VAPBO95292 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VAPBO95292 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VAPBO95292 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.65■□□□□ 0.42
VAPBO95292 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.65■□□□□ 0.42
VAPBO95292 AC005332.1-201ENST00000577698 1310 ntBASIC17.65■□□□□ 0.42
VAPBO95292 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.65■□□□□ 0.42
VAPBO95292 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VAPBO95292 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VAPBO95292 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.65■□□□□ 0.42
VAPBO95292 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VAPBO95292 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
VAPBO95292 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VAPBO95292 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.42
VAPBO95292 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VAPBO95292 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
VAPBO95292 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VAPBO95292 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VAPBO95292 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.64■□□□□ 0.42
VAPBO95292 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
VAPBO95292 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAPBO95292 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAPBO95292 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VAPBO95292 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
VAPBO95292 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAPBO95292 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
VAPBO95292 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAPBO95292 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
VAPBO95292 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAPBO95292 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAPBO95292 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.64■□□□□ 0.41
VAPBO95292 AL845331.1-201ENST00000424978 1190 ntBASIC17.64■□□□□ 0.41
VAPBO95292 AC007967.3-201ENST00000434308 558 ntBASIC17.64■□□□□ 0.41
VAPBO95292 FAM210CP-201ENST00000445714 574 ntBASIC17.64■□□□□ 0.41
VAPBO95292 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.64■□□□□ 0.41
VAPBO95292 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.64■□□□□ 0.41
VAPBO95292 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.64■□□□□ 0.41
VAPBO95292 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.64■□□□□ 0.41
VAPBO95292 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.64■□□□□ 0.41
VAPBO95292 AC011840.4-201ENST00000578471 627 ntBASIC17.64■□□□□ 0.41
VAPBO95292 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
VAPBO95292 AL353801.3-201ENST00000609898 542 ntBASIC17.64■□□□□ 0.41
VAPBO95292 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.64■□□□□ 0.41
VAPBO95292 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.64■□□□□ 0.41
VAPBO95292 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.64■□□□□ 0.41
VAPBO95292 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAPBO95292 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
VAPBO95292 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VAPBO95292 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAPBO95292 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAPBO95292 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms