Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.63■□□□□ 0.41
GPC4O75487 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC4O75487 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.63■□□□□ 0.41
GPC4O75487 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC4O75487 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
GPC4O75487 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC4O75487 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC4O75487 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC4O75487 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.63■□□□□ 0.41
GPC4O75487 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC4O75487 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GPC4O75487 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC4O75487 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.63■□□□□ 0.41
GPC4O75487 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GPC4O75487 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.63■□□□□ 0.41
GPC4O75487 RN7SL606P-201ENST00000472779 293 ntBASIC17.63■□□□□ 0.41
GPC4O75487 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GPC4O75487 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.63■□□□□ 0.41
GPC4O75487 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.63■□□□□ 0.41
GPC4O75487 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GPC4O75487 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
GPC4O75487 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.63■□□□□ 0.41
GPC4O75487 AP000550.4-202ENST00000639755 178 ntBASIC17.63■□□□□ 0.41
GPC4O75487 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC4O75487 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC4O75487 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GPC4O75487 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC4O75487 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GPC4O75487 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GPC4O75487 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.63■□□□□ 0.41
GPC4O75487 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GPC4O75487 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.63■□□□□ 0.41
GPC4O75487 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
GPC4O75487 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
GPC4O75487 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC4O75487 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
GPC4O75487 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.63■□□□□ 0.41
GPC4O75487 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC4O75487 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
GPC4O75487 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.63■□□□□ 0.41
GPC4O75487 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC4O75487 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
GPC4O75487 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC4O75487 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
GPC4O75487 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.62■□□□□ 0.41
GPC4O75487 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC4O75487 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC4O75487 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC4O75487 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.62■□□□□ 0.41
GPC4O75487 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC4O75487 AC108860.2-201ENST00000562760 2183 ntBASIC17.62■□□□□ 0.41
GPC4O75487 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
GPC4O75487 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC4O75487 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC4O75487 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC4O75487 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.62■□□□□ 0.41
GPC4O75487 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.62■□□□□ 0.41
GPC4O75487 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
GPC4O75487 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC4O75487 AL358472.4-201ENST00000633140 710 ntBASIC17.62■□□□□ 0.41
GPC4O75487 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.62■□□□□ 0.41
GPC4O75487 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC4O75487 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC4O75487 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GPC4O75487 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GPC4O75487 IER3-202ENST00000376377 1350 ntBASIC17.62■□□□□ 0.41
GPC4O75487 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC4O75487 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC4O75487 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.62■□□□□ 0.41
GPC4O75487 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC4O75487 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC4O75487 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.62■□□□□ 0.41
GPC4O75487 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC4O75487 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GPC4O75487 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC4O75487 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.62■□□□□ 0.41
GPC4O75487 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
GPC4O75487 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC4O75487 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
GPC4O75487 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC4O75487 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC4O75487 AC009053.2-201ENST00000563701 2365 ntBASIC17.61■□□□□ 0.41
GPC4O75487 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC4O75487 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC4O75487 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC4O75487 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.61■□□□□ 0.41
GPC4O75487 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC4O75487 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.61■□□□□ 0.41
GPC4O75487 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC4O75487 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC4O75487 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC4O75487 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.61■□□□□ 0.41
GPC4O75487 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.61■□□□□ 0.41
GPC4O75487 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC4O75487 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC4O75487 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.61■□□□□ 0.41
GPC4O75487 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.61■□□□□ 0.41
GPC4O75487 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC4O75487 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
GPC4O75487 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms