Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF11O60813 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF11O60813 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF11O60813 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF11O60813 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF11O60813 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.79■□□□□ 0.44
PRAMEF11O60813 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF11O60813 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF11O60813 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.79■□□□□ 0.44
PRAMEF11O60813 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF11O60813 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF11O60813 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF11O60813 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF11O60813 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PRAMEF11O60813 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF11O60813 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.79■□□□□ 0.44
PRAMEF11O60813 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.79■□□□□ 0.44
PRAMEF11O60813 SART3-203ENST00000546611 1184 ntBASIC17.79■□□□□ 0.44
PRAMEF11O60813 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.79■□□□□ 0.44
PRAMEF11O60813 NKAPP1-205ENST00000585790 367 ntBASIC17.79■□□□□ 0.44
PRAMEF11O60813 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF11O60813 AL121912.1-201ENST00000603683 238 ntBASIC17.79■□□□□ 0.44
PRAMEF11O60813 AC005332.8-201ENST00000622750 2735 ntBASIC17.79■□□□□ 0.44
PRAMEF11O60813 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF11O60813 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.79■□□□□ 0.44
PRAMEF11O60813 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PRAMEF11O60813 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PRAMEF11O60813 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF11O60813 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.79■□□□□ 0.44
PRAMEF11O60813 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF11O60813 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PRAMEF11O60813 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEF11O60813 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEF11O60813 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.78■□□□□ 0.44
PRAMEF11O60813 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.78■□□□□ 0.44
PRAMEF11O60813 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
PRAMEF11O60813 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PRAMEF11O60813 AC079781.3-201ENST00000449110 356 ntBASIC17.78■□□□□ 0.44
PRAMEF11O60813 SIGLEC30P-201ENST00000455569 941 ntBASIC17.78■□□□□ 0.44
PRAMEF11O60813 SCARNA2-201ENST00000458748 420 ntBASIC17.78■□□□□ 0.44
PRAMEF11O60813 BX005266.1-201ENST00000473402 457 ntBASIC17.78■□□□□ 0.44
PRAMEF11O60813 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.78■□□□□ 0.44
PRAMEF11O60813 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEF11O60813 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.78■□□□□ 0.44
PRAMEF11O60813 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
PRAMEF11O60813 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.78■□□□□ 0.44
PRAMEF11O60813 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PRAMEF11O60813 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.78■□□□□ 0.44
PRAMEF11O60813 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEF11O60813 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PRAMEF11O60813 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEF11O60813 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.78■□□□□ 0.44
PRAMEF11O60813 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEF11O60813 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.78■□□□□ 0.44
PRAMEF11O60813 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEF11O60813 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.77■□□□□ 0.44
PRAMEF11O60813 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.77■□□□□ 0.44
PRAMEF11O60813 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.77■□□□□ 0.44
PRAMEF11O60813 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEF11O60813 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PRAMEF11O60813 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PRAMEF11O60813 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEF11O60813 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PRAMEF11O60813 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
PRAMEF11O60813 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.77■□□□□ 0.44
PRAMEF11O60813 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PRAMEF11O60813 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PRAMEF11O60813 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEF11O60813 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEF11O60813 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEF11O60813 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEF11O60813 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEF11O60813 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEF11O60813 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEF11O60813 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PRAMEF11O60813 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PRAMEF11O60813 TPM4P1-201ENST00000436100 807 ntBASIC17.77■□□□□ 0.44
PRAMEF11O60813 PRYP5-201ENST00000451909 266 ntBASIC17.77■□□□□ 0.44
PRAMEF11O60813 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.77■□□□□ 0.44
PRAMEF11O60813 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEF11O60813 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.77■□□□□ 0.44
PRAMEF11O60813 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PRAMEF11O60813 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEF11O60813 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEF11O60813 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.77■□□□□ 0.44
PRAMEF11O60813 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEF11O60813 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEF11O60813 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PRAMEF11O60813 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PRAMEF11O60813 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
PRAMEF11O60813 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PRAMEF11O60813 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.77■□□□□ 0.43
PRAMEF11O60813 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PRAMEF11O60813 AC004817.3-201ENST00000602957 2129 ntBASIC17.77■□□□□ 0.43
PRAMEF11O60813 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.77■□□□□ 0.43
PRAMEF11O60813 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRAMEF11O60813 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRAMEF11O60813 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.76■□□□□ 0.43
PRAMEF11O60813 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
PRAMEF11O60813 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms