Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.45■□□□□ 0.22
HCN1O60741 AC246785.2-201ENST00000432512 513 ntBASIC16.45■□□□□ 0.22
HCN1O60741 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCN1O60741 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HCN1O60741 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.45■□□□□ 0.22
HCN1O60741 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HCN1O60741 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCN1O60741 AC233702.3-201ENST00000578656 1387 ntBASIC16.45■□□□□ 0.22
HCN1O60741 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCN1O60741 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCN1O60741 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCN1O60741 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.45■□□□□ 0.22
HCN1O60741 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HCN1O60741 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCN1O60741 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCN1O60741 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCN1O60741 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCN1O60741 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCN1O60741 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCN1O60741 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.45■□□□□ 0.22
HCN1O60741 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCN1O60741 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HCN1O60741 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.45■□□□□ 0.22
HCN1O60741 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HCN1O60741 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.44■□□□□ 0.22
HCN1O60741 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.44■□□□□ 0.22
HCN1O60741 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.44■□□□□ 0.22
HCN1O60741 AC006116.8-202ENST00000587620 1550 ntBASIC16.44■□□□□ 0.22
HCN1O60741 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.44■□□□□ 0.22
HCN1O60741 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.44■□□□□ 0.22
HCN1O60741 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.44■□□□□ 0.22
HCN1O60741 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HCN1O60741 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HCN1O60741 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.44■□□□□ 0.22
HCN1O60741 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.44■□□□□ 0.22
HCN1O60741 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HCN1O60741 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.44■□□□□ 0.22
HCN1O60741 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.44■□□□□ 0.22
HCN1O60741 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.44■□□□□ 0.22
HCN1O60741 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.44■□□□□ 0.22
HCN1O60741 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HCN1O60741 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HCN1O60741 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.44■□□□□ 0.22
HCN1O60741 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HCN1O60741 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HCN1O60741 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HCN1O60741 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.44■□□□□ 0.22
HCN1O60741 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCN1O60741 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.43■□□□□ 0.22
HCN1O60741 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCN1O60741 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HCN1O60741 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
HCN1O60741 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCN1O60741 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HCN1O60741 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.43■□□□□ 0.22
HCN1O60741 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCN1O60741 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCN1O60741 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
HCN1O60741 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.43■□□□□ 0.22
HCN1O60741 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
HCN1O60741 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HCN1O60741 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCN1O60741 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCN1O60741 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.43■□□□□ 0.22
HCN1O60741 AC011840.4-201ENST00000578471 627 ntBASIC16.43■□□□□ 0.22
HCN1O60741 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HCN1O60741 LINC01711-201ENST00000598340 967 ntBASIC16.43■□□□□ 0.22
HCN1O60741 AL121894.2-201ENST00000602977 491 ntBASIC16.43■□□□□ 0.22
HCN1O60741 AC004263.2-201ENST00000617183 678 ntBASIC16.43■□□□□ 0.22
HCN1O60741 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCN1O60741 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCN1O60741 AL024508.2-201ENST00000607749 1894 ntBASIC16.43■□□□□ 0.22
HCN1O60741 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCN1O60741 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.43■□□□□ 0.22
HCN1O60741 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCN1O60741 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.43■□□□□ 0.22
HCN1O60741 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.43■□□□□ 0.22
HCN1O60741 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HCN1O60741 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCN1O60741 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HCN1O60741 AL645608.8-201ENST00000606034 2086 ntBASIC16.42■□□□□ 0.22
HCN1O60741 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCN1O60741 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCN1O60741 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCN1O60741 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCN1O60741 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
HCN1O60741 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCN1O60741 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HCN1O60741 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCN1O60741 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCN1O60741 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCN1O60741 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCN1O60741 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
HCN1O60741 TSPY19P-201ENST00000418461 509 ntBASIC16.42■□□□□ 0.22
HCN1O60741 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.42■□□□□ 0.22
HCN1O60741 TSPY18P-201ENST00000441642 509 ntBASIC16.42■□□□□ 0.22
HCN1O60741 KRT17P6-201ENST00000453795 1220 ntBASIC16.42■□□□□ 0.22
HCN1O60741 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.42■□□□□ 0.22
HCN1O60741 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.42■□□□□ 0.22
HCN1O60741 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms