Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA12O60330 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA12O60330 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PCDHGA12O60330 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA12O60330 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA12O60330 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PCDHGA12O60330 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PCDHGA12O60330 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.41■□□□□ 0.38
PCDHGA12O60330 PRYP5-201ENST00000451909 266 ntBASIC17.41■□□□□ 0.38
PCDHGA12O60330 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA12O60330 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA12O60330 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA12O60330 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDHGA12O60330 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA12O60330 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDHGA12O60330 AC006557.2-201ENST00000592985 1240 ntBASIC17.41■□□□□ 0.38
PCDHGA12O60330 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
PCDHGA12O60330 MIR1199-201ENST00000621445 119 ntBASIC17.41■□□□□ 0.38
PCDHGA12O60330 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA12O60330 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA12O60330 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA12O60330 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA12O60330 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHGA12O60330 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA12O60330 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA12O60330 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA12O60330 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA12O60330 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA12O60330 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA12O60330 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA12O60330 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA12O60330 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 KRT18P27-201ENST00000427733 1299 ntBASIC17.4■□□□□ 0.38
PCDHGA12O60330 AC007967.2-201ENST00000432613 625 ntBASIC17.4■□□□□ 0.38
PCDHGA12O60330 HMGN1P19-201ENST00000436976 333 ntBASIC17.4■□□□□ 0.38
PCDHGA12O60330 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 AC122714.2-201ENST00000502787 707 ntBASIC17.4■□□□□ 0.38
PCDHGA12O60330 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA12O60330 MTDHP5-201ENST00000598980 586 ntBASIC17.4■□□□□ 0.38
PCDHGA12O60330 AL355385.1-201ENST00000606123 409 ntBASIC17.4■□□□□ 0.38
PCDHGA12O60330 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA12O60330 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA12O60330 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA12O60330 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA12O60330 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA12O60330 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA12O60330 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA12O60330 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGA12O60330 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHGA12O60330 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHGA12O60330 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHGA12O60330 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
PCDHGA12O60330 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHGA12O60330 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.39■□□□□ 0.38
PCDHGA12O60330 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHGA12O60330 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.39■□□□□ 0.38
PCDHGA12O60330 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGA12O60330 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PCDHGA12O60330 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA12O60330 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
PCDHGA12O60330 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PCDHGA12O60330 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA12O60330 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA12O60330 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA12O60330 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
PCDHGA12O60330 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA12O60330 AC096633.1-201ENST00000422446 749 ntBASIC17.39■□□□□ 0.37
PCDHGA12O60330 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGA12O60330 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.39■□□□□ 0.37
PCDHGA12O60330 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGA12O60330 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGA12O60330 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGA12O60330 AC005593.1-201ENST00000624894 515 ntBASIC17.39■□□□□ 0.37
PCDHGA12O60330 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PCDHGA12O60330 AC134684.3-201ENST00000641758 218 ntBASIC17.39■□□□□ 0.37
PCDHGA12O60330 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
PCDHGA12O60330 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA12O60330 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA12O60330 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PCDHGA12O60330 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms